KEGG   Trichosurus vulpecula (common brushtail): 118832700
Entry
118832700         CDS       T10126                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118832700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tvp03000]
    118832700
   04121 Ubiquitin system [BR:tvp04121]
    118832700
   03036 Chromosome and associated proteins [BR:tvp03036]
    118832700
Enzymes [BR:tvp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     118832700
Transcription factors [BR:tvp03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    118832700
Ubiquitin system [BR:tvp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     118832700
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118832700
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     118832700
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box Nop14 CDC45 PPP4R2 Cwf_Cwc_15 BUD22 Pox_RNA_Pol_19
Other DBs
NCBI-GeneID: 118832700
NCBI-ProteinID: XP_036595924
LinkDB
Position
X:9096678..9168730
AA seq 880 aa
MFMIMVSDCKFGIGAGFFSQVECQCCGDPSSRLQKFAQALTDSTTADSPLVRQQTAHYTG
RKGPGKERAYCPPGRPASRPPGLPPGRSAARPPGLPPGRPAALPACLPASQPGRPPASRA
PAARCSFQARLGPPEQLCLAWPRRLGDVHACSPNFQPPSPKQTEAPGTLEPRAPAAREGP
AARGPGRVGRAFQILVEGLASSAPPPQLAPTRVXLAQGLPRDRLSFPTRPQLLPPSLPPA
MKRSPRLPPPVRPTPSPPVSGARRRRVRCRKCEACVQGECGVCRYCRDMKKFGGPGRMKQ
SCVLRQCLAPRLPYSVTCSLCGEVDQNEETQDFEKKLMECCICNEVVHPGCLQMDGEGLL
NDELPNCWECPKCYQPDNPEKVQRRKMDDGDEGVVQAKVLRPLRSREEPIIQQPPHSSTT
MLQLIHDPGPPHTMVTRSSPGAGPSDHHSASRDERFKRRQLRLQATQREKENNPSGKKEL
SEVEKVRIRGTYLMVTPQRPNKELQGTSIVPKLQAITASSANLHHSPRVLVQHCPALTPQ
LRDEDDLGREQDFDDDDDDDDDDEEDEDDDEEEETAEEESAEEEESAEEEGEVATTNSQG
SWTQDEEESWMQREIWLSVFRYLNRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIV
PQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPL
LRTLDLRWAVGIKDPQIRDLLTPPTDKPGHDNRSKLRNMTDFRLAGLDITDATLRLIIRH
MPLLSRLDLSHCSYLTDQSPNLLTAVGSSTRNSLTEINMAGCNKLTDQSLLYLRRISNVT
LIDLRGCKQITRKACEHFISDLSINNLYCLSDEKLIQKIS
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtttatgattatggtgtcagactgcaagtttggcattggcgcgggtttctttagtcag
gttgaatgtcagtgctgtggagaccccagctccaggttgcagaaatttgctcaggccctg
acagacagcacgacagcagacagcccattagtacgacagcagacagcccattacacggga
aggaagggccccgggaaggagcgcgcttactgcccgcccggccgcccggcctcccggccg
cccggcctgcctcccggccgctcggccgcccggccgcccggcctgcctcccggccgcccg
gccgccctgcctgcctgcctgcctgccagccagcccggccgtccgcccgccagccgcgcg
cctgccgcccgctgctcttttcaggcgcgccttgggcctccggagcagctttgcctggcc
tggccgaggcgccttggggacgtccacgcttgttcacctaacttccagcccccctccccc
aagcaaacagaggctccggggacacttgaaccaagagcccccgcagcccgggagggacca
gcagcccgaggtccaggcagagtgggcagagcctttcagatactggtggaagggcttgcc
agcagtgctccccccccccagttggcccccaccagggtcnncttagctcaggggctcccg
agggaccggcttagctttcccaccaggccccagctgctcccgccaagcctccctcctgcc
atgaagcgctcccctaggctgccaccgcccgtgaggcccactccctcacccccagtatca
ggagcccgtaggaggcgggttcgatgccgcaaatgtgaggcctgcgtgcagggagagtgt
ggtgtgtgccgatactgccgggacatgaagaagtttggggggcccggccgcatgaagcag
tcctgtgtcctccgccagtgtttggccccccgactgccctactctgtcacttgttctctc
tgtggcgaggtggatcaaaatgaggagacacaggactttgagaagaaactgatggaatgt
tgtatctgcaatgaggttgttcatcctggttgcctgcagatggatggggaaggactgctt
aatgatgaactgccaaattgctgggagtgcccaaagtgctaccagccggataacccagag
aaagtgcagaggcggaaaatggatgatggtgatgagggtgtggtccaagccaaagttctc
cggcctcttcggagccgtgaggagccaatcattcagcagcctcctcactcatccactacc
atgctgcagctcatacatgacccagggccccctcatactatggtgacccgatcgtcccca
ggagctggccccagtgaccaccacagtgccagcagggatgaacgcttcaaaagaaggcaa
cttcggctccaggccacgcagagagaaaaggagaacaatcccagtggcaagaaagagcta
tctgaagtagagaaggtcagaattcgtgggacgtatctaatggtcacaccacagaggccc
aataaagagcttcagggaacttccattgtgcccaagctgcaggccatcacagcttcctct
gccaacctccatcattctccccgggtactggtacagcactgtccagctctgactccccag
ctgagagatgaagatgacctgggcagagagcaggactttgatgatgatgacgatgacgac
gatgatgatgaggaggatgaggatgatgacgaggaggaggaaactgcggaggaggagagt
gcagaggaggaggagagtgcagaggaggagggcgaggtagccacaacaaacagccagggc
agctggacacaggatgaagaggaaagctggatgcaaagggagatctggctatctgtcttc
cgttatctcaaccgcagagaactttgtgaatgtatgagggtatgtaagacatggtataaa
tggtgctgtgacaagagactctggacaaaaattgatttgagcaggtgtaaggccattgtc
ccccaggcactgagtggcattatcaagaggcagccagtgagccttgacctcagttggacc
aacatctccaaaaagcagctgacatggcttgtcaataggcttccaggcctgaaagacctc
ctcctagcaggctgttcttggtctgcagtctctgccctcagcacctccagctgccccctt
ctcaggacccttgaccttcgatgggcagtaggaatcaaggaccctcagattcgagacttg
ttgaccccaccaactgataagcctggtcacgacaatcgcagcaagctccgaaacatgaca
gattttcggctggctggcctagatattactgatgccacacttcgactcatcattcgccac
atgccccttctgtcacgacttgacctcagtcactgcagctaccttacagatcagtcacca
aatctactaacagctgttggctcttccacacgcaactccctcacagaaatcaatatggca
ggttgcaataagttgacagaccagtctctgttgtatctacgacgaatctctaatgtcacc
ttgattgaccttcgaggctgcaagcagatcacccggaaggcctgtgagcatttcatctca
gacctgtccatcaacaacctctactgcctgtctgatgagaagttgatccagaagatcagc
taa

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