Trichosurus vulpecula (common brushtail): 118847721
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Entry
118847721 CDS
T10126
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118847721 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118847721 (EFTUD2)
Spliceosome [BR:
tvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118847721 (EFTUD2)
Complex C
U5 SnRNP specific factors
118847721 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
118847721
NCBI-ProteinID:
XP_036612217
LinkDB
All DBs
Position
4:complement(191716529..191764235)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGREAKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctgtatgatgagtttggaaattatattggaccagagctagattctgat
gaagatgacgatgaattgggtagagaagccaaagatcttgatgagatggatgatgacgac
gatgatgatgacataggagaccatgatgatgatcaccctggaatggaggtggtcttgcat
gaggacaagaaatactacccaaccgctgaggaggtctatggacctgaggtggagacgata
gtgcaagaagaagacactcagcctctcacagagccaattataaaaccagtgaaaaccaag
aaattctctctgatggagcagacattgcctgtcactgtgtatgagatggatttcttggca
gacttgatggacaactcggaactgatcagaaatgtgaccctttgtggccatcttcaccat
ggcaagacttgttttgtagactgtctgatagaacagactcacccggaaatcagaaagcgc
tacgatcaagatctctgctacacagacatcctattcactgagcaagagaggggtgttggc
atcaaaagtactccagtgacagtggtcctgccagataccaagggaaagtcttacctcttc
aatatcatggacacaccaggacatgtgaatttctctgacgaggtcacagctggtttgcgc
atctctgatggggtggtgcttttcatcgatgcagctgagggggtgatgctgaataccgag
cgtctgatcaagcacgctgtgcaggagaggctggccgtcaccgtgtgcatcaacaagatt
gaccggctgattctagagctgaagcttcccccgacagatgcctattacaagctgcgccac
attgtggatgaggtcaatggattgatcagcatgtattccactgatgagaacctgatcctc
tctccgcttctgggcaatgtctgtttttccagctcccaatacagcatctgctttacactg
ggctcctttgccaagatttatgccgacacctttggtgacatcaattaccaagaatttgcc
aagaggctatggggtgacatttacttcaatcctaaaacgcggaagtttaccaaaaaggcc
ccaaccagcagctctcagcggagctttgtggagtttgtcttagagccgctttataagatc
ttagctcaggttgtgggagatgtggacaccagcctcccgagaaccctggatgaactgggc
atccacctgaccaaagaggagctgaagctgaacatacgtcctctccttaggctggtctgc
aaaaagttctttggggagttcacaggctttgtagatatgtgtgtgcagcatataccttct
ccaaaggtgggcgccaagcccaagattgagcatacttacactggcggtgtagattcagac
cttggtgaggccatgagcgactgtgatcctgacgggcctctaatgtgccacaccaccaag
atgtacagtactgatgatggggtacagttccatgcctttgggcgggtgctcagtggcacc
atccatgctgggcagccagtgaaggtgcttggggaaaactatacattggaagatgaagag
gattcccagatctgtactgtgggccggctgtggatttctgttgcgaggtaccacatagaa
gtgaaccgagttcctgcaggcaactgggttttgattgagggtgtggatcaacccattgtg
aagactgccacaatcactgagccccgaggcaatgaggaggctcagatcttccggcctttg
aaattcaataccacttcagtcatcaagattgctgtggaaccggtcaacccctctgagctg
cccaagatgctggatggcctgcgtaaagtcaacaagagctacccgtccctcaccaccaag
gtggaagaatctggggaacatgtgatcctgggcactggggagctctatctggactgcgtg
atgcatgacttacggaagatgtactcagaaatagacatcaaggttgctgacccagttgtc
acattttgtgagacagtggtagaaacttcttccctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctctcgagaagggtctggctgaggacata
gagaatgaagtagtacagatcacttggaacaggaagaagctaggcgagttcttccagaca
aagtatgactgggatttgctggcagcccgttccatctgggcctttggccctgatgccact
ggccccaacatcctagtagatgacactttgccctcagaggtggataaagctctgctgggc
tcagtgaaggatagcattgtccaaggtttccaatggggcaccagagaagggcccctgtgt
gatgagttgattcgcaatgtgaagttcaagatcctggatgcggttgttgcccaggaacca
ctgcaccggggcggaggccagatcattcccactgccaggagggttgtctattctgccttc
cttatggctacccctcgtctaatggagccctactactttgtggaagttcaggcccctgcg
gactgtgtctctgcagtctacactgtcttggccaggcgcagaggccatgtgacacaggat
gcacctatcccaggctctccactttataccatcaaggccttcatcccagctattgactca
tttggttttgaaactgacctccggacccatacccagggacaagccttctctctgtctgtc
ttccaccattggcagattgtacctggtgacccattggataaaagcattgtcatccgtccc
ctggagccacagccagcccctcacctggcccgggagttcatgatcaagacccgtcgtagg
aagggtctgagtgaggatgtgagcatcagcaagttcttcgatgatcccatgttgttggag
cttgccaagcaggatgtggttctcaactaccccatgtga
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