Trichosurus vulpecula (common brushtail): 118849734
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Entry
118849734 CDS
T10126
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04010
MAPK signaling pathway
tvp04020
Calcium signaling pathway
tvp04022
cGMP-PKG signaling pathway
tvp04024
cAMP signaling pathway
tvp04260
Cardiac muscle contraction
tvp04261
Adrenergic signaling in cardiomyocytes
tvp04270
Vascular smooth muscle contraction
tvp04713
Circadian entrainment
tvp04720
Long-term potentiation
tvp04723
Retrograde endocannabinoid signaling
tvp04724
Glutamatergic synapse
tvp04725
Cholinergic synapse
tvp04726
Serotonergic synapse
tvp04727
GABAergic synapse
tvp04728
Dopaminergic synapse
tvp04742
Taste transduction
tvp04911
Insulin secretion
tvp04912
GnRH signaling pathway
tvp04921
Oxytocin signaling pathway
tvp04924
Renin secretion
tvp04925
Aldosterone synthesis and secretion
tvp04927
Cortisol synthesis and secretion
tvp04929
GnRH secretion
tvp04930
Type II diabetes mellitus
tvp04934
Cushing syndrome
tvp04935
Growth hormone synthesis, secretion and action
tvp05010
Alzheimer disease
tvp05020
Prion disease
tvp05022
Pathways of neurodegeneration - multiple diseases
tvp05031
Amphetamine addiction
tvp05207
Chemical carcinogenesis - receptor activation
tvp05410
Hypertrophic cardiomyopathy
tvp05412
Arrhythmogenic right ventricular cardiomyopathy
tvp05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118849734 (CACNA1C)
04020 Calcium signaling pathway
118849734 (CACNA1C)
04024 cAMP signaling pathway
118849734 (CACNA1C)
04022 cGMP-PKG signaling pathway
118849734 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
118849734 (CACNA1C)
04929 GnRH secretion
118849734 (CACNA1C)
04912 GnRH signaling pathway
118849734 (CACNA1C)
04921 Oxytocin signaling pathway
118849734 (CACNA1C)
04935 Growth hormone synthesis, secretion and action
118849734 (CACNA1C)
04924 Renin secretion
118849734 (CACNA1C)
04925 Aldosterone synthesis and secretion
118849734 (CACNA1C)
04927 Cortisol synthesis and secretion
118849734 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
118849734 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
118849734 (CACNA1C)
04270 Vascular smooth muscle contraction
118849734 (CACNA1C)
09156 Nervous system
04724 Glutamatergic synapse
118849734 (CACNA1C)
04727 GABAergic synapse
118849734 (CACNA1C)
04725 Cholinergic synapse
118849734 (CACNA1C)
04728 Dopaminergic synapse
118849734 (CACNA1C)
04726 Serotonergic synapse
118849734 (CACNA1C)
04720 Long-term potentiation
118849734 (CACNA1C)
04723 Retrograde endocannabinoid signaling
118849734 (CACNA1C)
09157 Sensory system
04742 Taste transduction
118849734 (CACNA1C)
09159 Environmental adaptation
04713 Circadian entrainment
118849734 (CACNA1C)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
118849734 (CACNA1C)
09164 Neurodegenerative disease
05010 Alzheimer disease
118849734 (CACNA1C)
05020 Prion disease
118849734 (CACNA1C)
05022 Pathways of neurodegeneration - multiple diseases
118849734 (CACNA1C)
09165 Substance dependence
05031 Amphetamine addiction
118849734 (CACNA1C)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
118849734 (CACNA1C)
05412 Arrhythmogenic right ventricular cardiomyopathy
118849734 (CACNA1C)
05414 Dilated cardiomyopathy
118849734 (CACNA1C)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
118849734 (CACNA1C)
04934 Cushing syndrome
118849734 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118849734 (CACNA1C)
Ion channels [BR:
tvp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118849734 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
118849734
NCBI-ProteinID:
XP_036614588
LinkDB
All DBs
Position
5:204552645..205601073
Genome browser
AA seq
2205 aa
AA seq
DB search
MFSMFLNFEFKKGPKQNLIFFLISTKQSLILGDIWTFTMFQAFVKSTTPAYQTLPSHLPA
ETEGKFKGTLVHEAQLNCFYISHEGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSW
QAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQKKQGSTTATRPPRALLCLTLKNP
IRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTV
EAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFD
VKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMG
KMHKTCYNQEGLTDAPVEDDPSPCALDTGHGRQCQNGTICKAGWDGPKHGITNFDNFAFA
MLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKER
EKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETE
SVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIF
LVFLNTLTIASEHYNQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFD
CFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIA
SLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVM
YDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEE
KERKKLARTASPEKKQEVDKPAVEETKEEKIELKSITADGESPPTTKINVDDLQPNENEE
KGSYPNPEAGGEEEEEEPEMPVGPRPRPLSELHLKEKAVPMPEASAFFIFGHNNRFRLQC
HRIVNNNVFTNLILFFILLSSISLAAEDPVRHNSFRNQILFYFDIVFTTIFTIEIALKMT
AYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAK
GLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCTDSSKQTEAECKGNY
ITYKDGEVDHPIIQPRSWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDSHTEDKG
PIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYA
LKARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNI
LNMLFTGLFTVEMILKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSP
SMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFI
YAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACLPGKKCAP
ESESSNSTESETLCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSD
GTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEV
TVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDL
TAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSSFPQTFTTQRPLHINKA
GNSQGDTESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALGRFPCPTGYPSTVSTVEG
HGTPLSPAIRVHETAWKLSSRRYHCRDSRIAMVCPEEAAPNKSYEGNVNEDTEYCSEPSL
ISTEMLSYQDDENRQLTPPEDKTRQSMKRGFLHSSSLGRRASFHLECLKRQKNQGGDISQ
KTVLPLHLVHHQALAVTGLSPLLQRSHSPNTTFPRPSATPPATPHGQAWPLQPIPTLWLE
GAESNEKLNSSFPSIHCSSWYAENANCGDSRGSTSRRARPVSLTVPSQSGAAGRQFHGSA
SSLVEAVLISEGLGQFAQDPKFIEVTTQELADACDMTIEEMENAADNILSGSSKQSPNGN
LLPFINCRDPGQDQAGGEEEEGVPNPECRKSEEELQDSRLYISSL
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgttttccatgtttttaaattttgaatttaaaaaaggtccaaaacagaacttaattttt
tttttaatttcaacaaagcaatcactgatactgggagatatttggacatttacaatgttt
caagcctttgtaaagtcaaccactcctgcatatcaaacactacctagtcaccttccagca
gaaacagaggggaagtttaagggcactttggtgcatgaagctcaactcaactgtttctac
atctcacatgaaggttccaactatgggagccctcgcccagctcatgccaacatgaatgcc
aatgccgcggcagggcttgctcctgagcacatccccaccccaggagccgccctttcatgg
caggcggccattgatgctgcccggcaagccaagctgatgggcagtgctggcaatgctacc
atctccactgccagttctactcagaggaaacggcagcagtatgggaagcagaagaagcaa
gggagcacaacagccactcgcccaccccgtgcattgctgtgcctgaccctgaaaaatccc
atccggagagcatgcataagcattgttgaatggaaaccatttgaaatcattattttactg
actatttttgccaattgtgtggccttagcgatctatattccctttccagaagatgattca
aatgccaccaattccaacctggaacgagtggaatatctctttctcatcatttttacagtg
gaagcatttttaaaagtaatagcttatggacttctctttcaccccaatgcttacctccga
aatggttggaatttactagattttataattgtggtagtagggctgtttagtgcaatttta
gaacaagcaaccaaagcagatggggcaaacgcattaggaggaaaaggggctggatttgat
gtaaaggccctgagggctttccgagtgctgcgccccttacggctagtatctggagtgcca
agtctacaagtggttttaaattccatcatcaaggccatggtcccgctgctgcacattgcc
ctgcttgtgctatttgtcataatcatctatgccatcattggactggagctcttcatgggg
aagatgcacaagacttgctacaaccaggagggtttaacagatgccccagtagaagatgac
ccttctccttgtgcccttgacacgggacatggacggcagtgccagaatggcaccatatgt
aaagcagggtgggatggacccaaacacggcatcaccaactttgacaattttgccttcgcc
atgttaactgtgttccagtgcattacaatggagggttggacagatgtgctgtactggatg
caagacgcaatgggctatgagttaccttgggtgtattttgtcagtctggtcatctttgga
tcctttttcgttctaaatctggttctcggtgtattgagcggagagttttccaaagagaga
gagaaggcaaaggctcgaggagacttccagaagctgcgagagaagcagcagctggaggag
gacctcaaaggctacctggactggatcactcaagctgaagatattgaccctgagaatgaa
gatgaaggcatggatgaggagaaaccccgaaatatgagcatgcccacaagcgagacagag
tccgtcaacactgaaaacgtggctggaggcgacatcgagggagagaactgtggggcaagg
ctggcgcaccgaatctccaaatcaaaattcagccgctactggcgccggtggaaccggttc
tgcagaaggaagtgccgggccgctgtcaaatccaatgttttctactggcttgttattttc
cttgtgttcctcaacacccttaccatcgcctcagagcactacaaccagccccactggctc
acagaagtccaagacactgccaacaaggccctgctggctcttttcactgcagagatgctg
ttgaagatgtacagccttggcctccaggcctattttgtgtctctgttcaaccgctttgac
tgcttcatcgtgtgtggcggaatcctggagaccatcctggtagagaccaagatcatgtcc
cccctggggatctcagtgttgagatgtgtccggctgctgaggatattcaaaatcacaagg
tattggaactccttgagcaacctggtagcgtcattactgaattcagtgcgatcaatcgcc
tcgctcctgctactcctttttctcttcatcatcatcttctctctcctggggatgcagctc
tttggtggaaagttcaactttgacgagatgcagacccggaggagcacatttgataatttc
ccccagtctcttctcactgtgtttcagatcctgaccggggaggactggaattcggtgatg
tatgatgggatcatggcttatggagggccctcttttccagggatgttagtctgtatttat
ttcatcatccttttcatctgtggaaactacatcttactgaatgtattcttggccattgct
gtggacaatctggccgatgccgagagcctcacgtctgcccagaaagaagaggaggaggaa
aaagagaggaagaagctagccaggactgccagccctgagaagaagcaagaggtggacaaa
ccagctgtggaagagaccaaagaggagaaaattgagctaaagtcaattactgctgatggg
gagtctccgcccaccaccaagatcaacgtggatgacctccaacccaatgaaaatgaggag
aaaggttcctatcccaacccagaagctggaggagaagaagaggaggaggagcctgagatg
cctgtgggcccccgccctcgcccactctctgagttgcacctcaaggagaaggcagtaccc
atgccagaagccagtgcattcttcatctttggccataacaacaggttccgtcttcagtgt
caccgcattgtcaacaacaatgtctttaccaatctgatccttttcttcattctgctcagc
agcatctccctggctgctgaggacccggtccgacacaactcctttcggaaccaaattctg
ttttattttgatatagtttttactaccattttcaccattgaaattgctctgaagatgacc
gcctatggggctttcctccacaagggctctttctgcaggaactacttcaacatcttggac
ctcctcgtggtcagcgtgtccttgatctccttcggtatccagtccagtgccatcaatgtt
gtcaagatcttgagagttcttagagtactcagacccctgagagctatcaacagggccaag
ggactaaagcatgtggtccagtgtgtgtttgttgctatccgaaccatagggaacattgtg
attgtcaccacgcttctgcagttcatgtttgcctgcattggggtacagcttttcaagggc
aaactctacacctgtacagacagttccaaacagactgaggcagaatgcaagggcaactat
atcacatacaaagatggtgaagtggatcatcccatcattcagcctcgaagttgggagaat
agcaaatttgactttgacaatgtcctgacagccatgatggccctcttcactgtctccacc
tttgaaggatggccagagcttctataccgatccatcgactcacacactgaagataaggga
cccatctacaactaccgagtagagatctccatcttcttcatcatctacatcatcatcatc
gccttctttatgatgaacatctttgtgggtttcgtcattgtcaccttccaggagcagggg
gaacaggagtacaagaactgtgaactggacaagaaccagcgacagtgtgtagagtatgct
ctcaaggctcggcccttgagaaggtacatccccaagaaccaacaccagtacaaagtgtgg
tatgtggttaattccacctattttgagtacttgatgttcgtcctcatccttctcaacacc
atctgcttggccatgcagcactacggtcagagctgtcttttcaaaatcgccatgaacatt
ctcaacatgctcttcactggcctcttcaccgtcgagatgatcctgaagctcattgcattc
aaacccaagcactatttctgtgatgcatggaatacatttgacgccttgattgttgtgggt
agcattgttgatatagcaatcaccgaggtaaacccagctgaacatacccaatgctctccc
tctatgaatgcagaggagaactcccggatctccatcaccttcttccggctcttccgggtc
atgcgtcttgtcaaattgctgagccgtggggaaggcatccggaccctgctctggactttc
atcaaatctttccaggctctaccctatgtggctcttctgatagtgatgttgttcttcatc
tatgctgtcattggaatgcaggtgtttggcaaaattgccctgaatgacaccacagaaatc
aatcgaaacaacaactttcaaaccttccctcaagctgtgctgctgctcttcaggtgtgcc
acaggggaggcatggcaagatatcatgctagcctgtctgccgggaaagaagtgtgcccct
gagtcggaatctagtaacagtactgaatcagaaacgctctgtggtagcagctttgctgtc
ttctactttatcagtttctacatgctctgtgccttcctgatcatcaacctctttgtagct
gtcatcatggacaacttcgactacctgacaagagactggtccatcttaggtccccatcac
ttggatgaattcaaaaggatctgggcagaatatgaccctgaggccaagggtcgtatcaaa
cacctggatgtcgtgactttactccggaggatccaaccccccctagggtttggaaagctg
tgccctcatcgagtagcatgcaaacgtctggtgtccatgaacatgcctctgaacagtgat
gggactgttatgttcaatgctacattgtttgccctggtcagaacagccttgaggatcaaa
acagaagggaacctggaacaagccaatgaagagttgcgagcaattatcaaaaagatctgg
aaacggactagcatgaagctcctagaccaagtggttcccccggctggtgatgatgaagtg
actgttgggaagttctacgccaccttcctgatccaagagtatttccgaaaatttaagaag
cgcaaagagcaaggcctagtgggcaagccctcccaaaggaatgcactgtctctacaggct
ggtcttcgtacactgcatgacatcggaccagagattcgccgggccatctctggggacctg
acagctgaggaggaattggacaaggctatgaaggaagctgtttctgctgcctctgaagat
gacatctttaggagggccggtggcctgtttggcaatcatgtcagctactaccaaagcgat
ggtcgaagctccttcccccagaccttcaccacccagcgcccactgcatatcaacaaggcg
ggtaacagccaaggcgacacggagtcaccatcccatgagaaactagtggactccacattc
actcccagcagctactcatcctctggttccaatgccaacatcaacaacgccaacaacact
gccctgggccgcttcccctgtcccaccggttaccccagtacggtcagcacagtggagggc
catgggacccccttgtcccctgccatccgggtgcacgagacagcatggaagctcagctcc
aggagataccactgccgggacagccggatagccatggtgtgccccgaggaggcagccccc
aacaagagctatgaagggaatgtgaatgaggacacagaatattgcagcgagcccagcctg
atctccaccgagatgttatcctaccaagatgatgagaacagacagctgacaccaccagaa
gataagaccaggcagtctatgaagagaggattcctccactcttcctcactaggtcgaaga
gcttccttccatttggagtgtctaaagagacaaaagaaccaagggggagacatctctcag
aagacagtgctgcccttgcatctggttcatcaccaggcattggcagtgacaggcctcagc
cctctccttcagagaagccattctccaaacaccacattccccaggccaagtgccaccccc
ccagcaactcctcatggccaagcctggcccctccagcccatccctacactgtggctagaa
ggagcagagtccaatgagaagctcaacagcagcttcccatcaatccactgcagctcctgg
tatgcagagaatgccaactgtggagacagcaggggcagcacctcccggagagcccggcca
gtctccctcactgtgcccagccagtctggggcagctggcagacaattccacggcagcgca
agtagtttagttgaagcggtcttgatttcagaaggactgggacagtttgctcaagatccc
aagttcatcgaagtcacaacccaagaacttgctgatgcctgtgatatgacaattgaggaa
atggagaatgccgctgacaatatcctcagtggtagcagcaagcagagccccaatggcaac
ctattaccttttattaactgcagggacccggggcaggaccaagcaggtggtgaggaggaa
gagggagtgcccaaccccgaatgtcgaaagagcgaggaggagcttcaggacagcaggctt
tatatcagcagcctgtag
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integrated database retrieval system
