Trichosurus vulpecula (common brushtail): 118852280
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Entry
118852280 CDS
T10126
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp01524
Platinum drug resistance
tvp04115
p53 signaling pathway
tvp04210
Apoptosis
tvp04215
Apoptosis - multiple species
tvp05010
Alzheimer disease
tvp05012
Parkinson disease
tvp05014
Amyotrophic lateral sclerosis
tvp05016
Huntington disease
tvp05020
Prion disease
tvp05022
Pathways of neurodegeneration - multiple diseases
tvp05134
Legionellosis
tvp05152
Tuberculosis
tvp05160
Hepatitis C
tvp05161
Hepatitis B
tvp05162
Measles
tvp05164
Influenza A
tvp05168
Herpes simplex virus 1 infection
tvp05169
Epstein-Barr virus infection
tvp05200
Pathways in cancer
tvp05222
Small cell lung cancer
tvp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118852280 (APAF1)
04215 Apoptosis - multiple species
118852280 (APAF1)
04115 p53 signaling pathway
118852280 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118852280 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
118852280 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
118852280 (APAF1)
05160 Hepatitis C
118852280 (APAF1)
05164 Influenza A
118852280 (APAF1)
05162 Measles
118852280 (APAF1)
05168 Herpes simplex virus 1 infection
118852280 (APAF1)
05169 Epstein-Barr virus infection
118852280 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
118852280 (APAF1)
05152 Tuberculosis
118852280 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
118852280 (APAF1)
05012 Parkinson disease
118852280 (APAF1)
05014 Amyotrophic lateral sclerosis
118852280 (APAF1)
05016 Huntington disease
118852280 (APAF1)
05020 Prion disease
118852280 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
118852280 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118852280 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118852280 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
APAF1_C
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
NB-ARC
WHD_APAF1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_NOL10_N
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
CARD
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_EIPR1
DSE1_N
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
ASA1
Ge1_WD40
WD40_like
PAC11
Beta-prop_HPS5
RMC1_N
PEP5_VPS11_N
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_DCAF4
KNTC1_N
TRM82_WD
Beta-prop_RIG_1st
CARD_2
AAA_16
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_WDR11_2nd
Beta-prop_RSE1_2nd
UCP007778
ATPase_2
AAA_18
nSTAND6
NPHP3_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
118852280
NCBI-ProteinID:
XP_036617882
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All DBs
Position
5:complement(215496699..215585208)
Genome browser
AA seq
1251 aa
AA seq
DB search
MDAKARNCLLQHKEALERDIKTSYLMDHLISDQVLSLSEEEKIRNQPTQKKRASMLIRVL
LAKDNNSYISFYNALLHEGYKDLAFLLQDGIPLASYNGKDSVDGVTSYVKTVLCEGGVPQ
RPVVFVTREKLVNSIQEKLYKLKGEPGWVTVYGMAGCGKSVLAAEAVRDHSLLKSCFPGG
VHWVSIGKQDKSGLLMKLQNLCTRLDQDGAFSQRLPLNLEEAKDRLHFLMLRKCPGSLLI
LDDIWDSWVLKAFDSHHQILLTSRDKSVTDSVMGPKYVVPVESGLGKEKGLEILALFVNM
KKTDLPDQAHSIVRECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVERLREDLQKYYKDLSILQKDVRVPTKVLCILWDMETEEVEDILQEFINK
SLLFYDRNGKSFRYYLHDLQIDFLVEKNRDQLQELHRKVVTQFQRYFKVHSLTSDQEDSM
YWYSFLAYHMASADMRQELCDLLFSLDWIKAKTELVGPAHLIHEFMQYGHLLDKKDCSVC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYRQARLQAKQEVDKGGLYLEWINKK
TIKKFSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVLKAETGEKLLEIEAHEDEVL
CCAFSKDGRFIATCSVDKKVKIWNSKTGELVHTYDEHSEQVNCCHFTNMENHLLLATGSS
DHFLKLWDLNKKECRNTLFGHTNSVNHCRFSPDDKLLASCSADGTLRLWDVSSANEWSSI
DVRQHFLNSDGFQEDVDVMVKCCSWSSDGARVMAAAASRLLIFDVHSRSLVGEIHTGHSS
TIQYCDFFPKSHLAVVALSHYCVELWNTDTGLKVADCRGHLSWVHCVAFSPDGSSFLTSS
DDQTIRLWETRKVCKNSAIMLKQEVDVVFREDEVMVLAIDNVRRLQLINGKTGHTDYLTE
AQKSRISCCCLGPDLHYVALGEEDGSVKILELPNGREFRSRMGHEKAVRRVQFTSDGRTL
ISSSDDSTVQVWNWQSEEFVFLKAHQEPVKDFRLLQNSRLLTWSFDGTVKVWNILTGKVE
KDFVCHRGTVLSCDVSSDGTKFSSASADKTAKIWSFESRLALHELRGHEGCVRCSVFSGD
STLLATGDDNGEIRIWNVSTGEQLHSCVPVTVEKGEATYVGWVTDLRFSPDGRMLVSAGG
YLKWWNVDTGESLQTFYTNGTNLKTILVSPTFKTYVTVDNLGILYVLQTLE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagctcggaactgtttgctccagcacaaggaagccctggaaagagacatc
aagacttcctacctcatggatcacttgatttctgatcaggttcttagtttatcagaggag
gagaaaataagaaatcagcctacccaaaagaagagagcatctatgctaattagggtgtta
cttgcaaaagataataactcatacatatctttctacaatgctcttctacatgaaggctac
aaggatttggctttccttctccaagatggtattcctcttgcttcatataatggaaaggat
tctgtggatggagtgacttcatatgtgaagacagtgctgtgtgaaggtggtgtaccacag
aggcctgttgtatttgtgaccagggagaagctggtgaactcgatccaggaaaagctttat
aaactcaaaggtgaacctggatgggtcacagtctatggaatggcaggctgtgggaaatct
gtcctagccgcagaagctgtccgggaccacagcctcttaaaaagttgcttcccaggaggc
gtgcattgggtctccatcggcaaacaggacaaatctgggctcctgatgaaactccagaat
ctgtgcacacggctggaccaggatggtgctttttcccagagactcccgctgaaccttgag
gaagccaaagaccgcctccatttcttaatgctgcgcaagtgcccagggtctcttttgatc
ttggatgacatttgggattcgtgggtgctaaaagcttttgacagtcaccatcagatcctt
ctcacgagcagagataagagtgtgaccgactcggtgatgggtcccaaatatgtcgtccct
gtggagagtggcttaggaaaagagaaaggattggaaatcttggcactctttgttaatatg
aagaaaacagacctgcccgaccaagctcatagtattgtgagggagtgtaaaggttcccct
cttgtagtatctttaattggtgctctattacgtgatttccccaatcgctggggctactac
ctcaggcagcttcaaaataagcagtttaaaagaattaggaagtcttcatcttatgactat
gaagccttagatgaagccatgtccataagcgtggagagactgagggaagacctccagaag
tattataaggacctttccatcctgcagaaggatgttagagtacctaccaaggtattatgt
attctttgggacatggagactgaagaggttgaggacatcctacaagaattcattaataaa
tcactcctgttctatgaccgaaatggaaagtcattccgttattatttacatgatcttcag
attgatttccttgtggagaagaaccgcgaccagctccaggagctgcacagaaaggtggtg
actcagttccagagatatttcaaggtacactccctcacttccgaccaagaagactccatg
tactggtacagctttctggcatatcacatggccagtgctgacatgcgccaagaactttgt
gatctactgttttccctagattggattaaagcaaagactgagctggtggggcctgctcat
ctgatacatgagtttatgcagtatggccatctactggataagaaggattgctccgtgtgt
gagaattttcaagagtttttatctctcaacggacaccttcttggacgccagccgtttccc
aatattgtgcagctaggtctctgtgaaccagaaacttctgaagtgtaccggcaagccaga
ctacaggccaagcaggaggtcgataaaggggggctttacttggaatggataaacaaaaaa
accatcaagaaattctcccgtttagttgtccgcccccacacagatgctgtttatcatgcc
tgcttttcagaggatgggcagaggatcgcttcctgtggtgctgataaaaccttacaggtg
ctgaaagcagaaacgggagagaagctcctggaaatcgaagcccatgaggacgaagtgctt
tgttgcgctttctccaaggatggtagattcatagcgacctgttcagtggataagaaagta
aagatttggaattcaaagactggggagctggtacacacctatgatgagcattcggagcag
gtcaactgctgtcactttaccaatatggagaaccacctcctcttagccaccggatccagt
gaccatttcctcaaactctgggatctgaataagaaggaatgtcggaacaccctgtttggt
catacaaattccgtgaaccactgccgattctcacctgatgataaacttctggctagttgc
tcagcggatggaacgttgaggctttgggatgtcagttcagccaatgaatggagcagcatt
gacgtgcggcagcacttcctcaattctgacgggtttcaggaagatgtggacgtgatggtg
aaatgctgctcctggtccagcgatggggcacgggtgatggccgctgctgccagcaggctc
ttgatttttgatgtccatagcaggagcctggtaggagaaatccacactggtcacagcagc
accatccagtactgtgacttctttcccaagagtcatctcgctgtggtagctctgtcccac
tactgcgtggagttatggaatacggatacaggtttaaaagtagcagattgccgaggtcac
ctgagttgggttcactgtgtagcattttctcctgatggatcttcatttttgacgtcttct
gatgatcagacaatcaggctttgggagacaagaaaagtgtgtaagaattcagctatcatg
ttaaagcaggaagtagatgttgtattccgggaggatgaagtaatggttcttgcaattgac
aatgtacgacgcttacaactaattaatggaaaaacaggtcataccgattatctgacagaa
gcccagaaatctcgaattagctgctgttgtctgggtccagacctgcactatgtggcattg
ggagaagaagatgggtctgtaaagattttagagctccccaatggaagagagtttcgatct
cgaatggggcacgagaaagctgtacggcgggtgcagttcacatctgatgggaggactctg
atttcgagctctgatgattctacagttcaggtgtggaactggcagtcggaggagtttgtg
tttctcaaagcgcaccaagagcccgtgaaggactttaggctcctgcagaattcacggctc
ctgacttggtcatttgatggcacagtgaaggtttggaatatccttactggcaaagtagag
aaggactttgtttgccaccgaggtacagttttatcctgtgatgtttcttctgatggcacc
aagttttcatctgcctctgctgacaagactgcaaagatttggagctttgagagccgactg
gctcttcacgagctgcggggtcacgaaggctgtgtgcgatgctctgtcttctctggggat
agcaccctcctggcgacaggagatgacaacggagaaatcaggatatggaacgtctccact
ggcgagcagcttcattcctgtgttcctgtgactgtggagaaaggagaggccacctacgtg
ggctgggtgaccgacctgcgcttttctcctgatggcagaatgctcgtgtcagctgggggc
tacctgaagtggtggaacgtggacaccggcgaatccctgcagaccttctatacgaacgga
actaacctcaagacaatactcgtgtctcctactttcaaaacatatgtgactgttgataac
cttggaattttatatgtcctgcaaacattagaatga
DBGET
integrated database retrieval system
