Trichosurus vulpecula (common brushtail): 118852563
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Entry
118852563 CDS
T10126
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118852563 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118852563 (KDM2A)
04121 Ubiquitin system [BR:
tvp04121
]
118852563 (KDM2A)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118852563 (KDM2A)
Enzymes [BR:
tvp01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
118852563 (KDM2A)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118852563 (KDM2A)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118852563 (KDM2A)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118852563 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118852563 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
DUF7885
JmjC
Cupin_8
Cupin_1
Motif
Other DBs
NCBI-GeneID:
118852563
NCBI-ProteinID:
XP_036618100
LinkDB
All DBs
Position
6:276923225..277021562
Genome browser
AA seq
1161 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLDEKLHTNKYNASFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPTTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAQN
LELYENWLLSGKQGDIFLGDRVSECQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLS
MDLELNGLESGSVDEEASEKEPRRLSSRRSILTSPMANGVNVDYDGLGKTCRNLPGLKRT
LSVDSSSESGRSSHNGQVWDPQCSPRKDKQIHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELAHSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMK
QSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGL
LNDELPNCWECPKCYQEDTSEKVQKRKMDDSDEDVVQAKVLRPLRSCDEPLTPPPHSPTA
MLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMMREKENNPS
GKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSTNLRHSPRVLVQHCP
TRTPQRGDEEGLAGEEEDEDEDEEEEDSAEEGGAARLNGRGGWAQDGDESWMQREVWMSV
FRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSW
TNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRD
LLTPPTDKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQS
SNLLTAVGSSTRNSLTEINMAGCNKLTDQSLLYLRRISNVTLIDLRGCKQITRKACEHFI
SDLSINSLYCLSDEKLIQKIS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaggaagaaagaatccgttatagccagagactgcgtggcaccatgcgaagg
cgctatgaagatgatggcatttctgatgatgaaattgaaggaaaaaggacttttgacctg
gatgaaaaactccacaccaacaaatacaatgctagctttgtcacctttatggaaggaaaa
gattttaatgtagaatatatccagcggggtggcttgagagaccctctgattttcaagaat
tctgatggacttggaataaagatgccagacccggacttcactgtgaatgatgtgaaaatg
tgtgtggggagccgtcgaatggtggatgtcatggatgtgaacacccagaagggcatcgaa
atgactatggcccagtggacccgctattatgagactccagaggaagagcgtgagaaactc
tataatgtcatcagcctggaattcagccacaccagattggagaacatggtgcagaggcct
accacggtggactttattgattgggtagacaacatgtggccaaggcacttgaaagaaagc
cagacagagtccaccaatgccatcctggagatgcagtaccccaaagtgcagaagtactgt
ctcatgagcgtccggggctgctacacagactttcacgtggacttcggtggcacctctgtg
tggtaccacatacaccaagggggaaaggtcttctggctcataccacctacggcccaaaac
ctggaactgtatgagaactggctgctgtcagggaaacagggagacatcttcctgggtgac
cgtgtgtcagaatgccagcgcatcgagctcaagcagggatacacttttgtcatcccctcg
ggctggattcatgcagtgtacacccccacagacacattagtgttcgggggcaactttttg
cacagttttaacatccccatgcagctcaaaatctacaacattgaagatcggacacgggtc
ccaaataagttccgttatccattctactatgagatgtgttggtacgtgttagagcgctat
gtctactgcatcaccagccgctcccacctgaccaaggatttccagaaagaatccctcagc
atggatttggagttaaatggtttggaatctggaagcgtagatgaggaggcttcagagaag
gagccgaggcgcctgagcagccgacgctccatcctcaccagccccatggccaacggagtc
aatgtggattatgatgggctgggcaaaacctgtaggaacctgccagggctgaagagaacc
ttgtcggtggactcatcttcagaatctggccggagctcccacaacggtcaagtgtgggat
cctcagtgtagcccccggaaggacaagcagattcacctaactcattttgagctggaaggt
ctccggtgccttgtcgataagctagagtcactgccgttacacaagaaatgtgtcccaacg
gggatcgaagacgaagacgctctcattgctgatgtcaagatactgctagaggagcttgcc
catagtgatcccaagttagccctcactggagtccccatagtacagtggcccaaaagggac
aagcttaaattccccacgcggcccaaggtgagggttcccaccattcctatcacaaagcct
cacaccatgaagcctgctcctcgactgaccccagtaagacccgctgcctcgcccatcgtc
tcaggagcccggcggcggcgggttcgatgccggaaatgcaaggcctgtgtccaaggcgag
tgtggtgtgtgccactactgcagggacatgaagaagttcggggggcctggtcgcatgaag
cagtcatgtgtccttcggcaatgtctggcaccccgactacctcattcggtcacgtgttct
ctctgtggagaggtggatcagaatgaggaaacccaggactttgagaagaagctcatggaa
tgttgtatctgcaatgagatcgttcatcctggctgcctgcagatggatggagaaggacta
ctcaatgatgagctgcccaattgctgggagtgcccaaagtgctaccaggaggacacctcg
gagaaggtgcagaaacgtaaaatggatgacagcgatgaagatgtggtccaagccaaagtc
ctgcggcctctgcggagctgtgacgagccactcacaccaccccctcactcacccacggcc
atgctgcagctcatccatgacccggtgtcccctcgaggcatggtgacccggtcctccccg
ggagctggtccaagtgaccaccacagcgccagccgcgatgagcgcttcaaacggcggcag
ctgctgcggcttcaggccacagagcgaacgatgatgcgagaaaaggagaataatcctagt
ggcaagaaggagctctccgaagtagagaaggccaaaattcgggggtcctacctcacagtc
acactgcagagacccaccaaagagctgcacggaacatccattgtgcccaagctgcaggcc
atcacggcctcctccactaacctccgccattctccccgggtgctggtacagcactgcccc
actcgcactccccagcggggggacgaagaaggcctggccggagaggaggaggacgaggat
gaggacgaggaggaggaggacagtgcagaggagggcggggcagccagactgaacggccgg
ggcggctgggcgcaggacggggacgagagctggatgcagcgggaggtctggatgtctgtc
ttccgctacctcagccgcagagaactttgtgaatgtatgcgggtgtgcaagacgtggtat
aaatggtgctgtgacaagagactctggacgaagattgatttgagcaggtgcaaggccatc
gtccctcaggctttgagtggcatcatcaagaggcagcccgtcagcctggacctcagttgg
accaacatctccaaaaagcagctcacctggcttgtcaacaggcttcccggcctgaaagat
ctcctcctagcaggctgctcctggtctgcggtctctgctctcagcacctccagctgcccc
cttctcaggaccctggaccttcggtgggccgtaggaatcaaagaccctcagattcgagac
ttgctgaccccgccgactgataagcctggtcaggacaatcgcagcaagctccggaatatg
actgattttcggctggccggcctggacatcactgatgccaccctccgcctcatcatccgc
cacatgccgcttctgtctcgactcgatctcagtcactgcagccaccttacagatcagtcc
tccaatctgctaacagccgtgggctcttccacacgcaactccctcacagaaatcaatatg
gcaggttgcaataagttgacagaccagtccctgttgtatctacggcgcatctctaacgtc
accttgattgaccttcgaggctgcaagcagatcacccggaaggcctgtgagcatttcatc
tcagacctgtccatcaacagcctctactgcctctctgatgagaagttgatccagaaaatc
agctaa
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