Trichosurus vulpecula (common brushtail): 118856139
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Entry
118856139 CDS
T10126
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp00310
Lysine degradation
tvp01100
Metabolic pathways
tvp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118856139 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
118856139 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118856139 (SETDB1)
Enzymes [BR:
tvp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
118856139 (SETDB1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118856139 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118856139 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
118856139
NCBI-ProteinID:
XP_036622146
LinkDB
All DBs
Position
7:complement(45421071..45448248)
Genome browser
AA seq
1278 aa
AA seq
DB search
MTSLPGCFGLGAAAAAGMEPQEIAELQQAVVEELGISMEELRQFIDEELEKMDCVKLRKK
QLAELETWVVQKESEVAHVDELFDEASRAVTNCESLVKDFYSKLGLQYRESSSEDEASKP
TEVIEIPDEDDDVLSVDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKTSSQD
LNKGALSQVPVELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGRKFKVKFDNKGK
SLLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDD
GYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWE
GTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQGGQLRT
RPNMGAVRSKGPVVQYTQDLTGTGTQFKPLEPPHTTSLPAPTLSPQVADLESLESQLAQA
RKQVAKKSTSFRLGSVGSGHSSPTSPGLNEAVPGGKSGVGQTVRLTPGSVAPGPTFPAFH
GMLERAPAEPSYRAPMEKLFYLPHACSHTCLTRVRPVSNAQYRGKNPLLVPLLYDFRRMT
ARRRVNRKMGFHVIYKTPCGLCLRTMSEIERYLFETTCDFLFLEMFCLDPYVLVDRKFQP
YKPFYYILDITHGQEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGWEFLVGCDCK
DGCRDKSKCACHQLTIQATACTPGGQINPNSGYQHKRLDECLPTGVYECNKRCKCNLNMC
TNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIARGSFVCIYAGKILTDDFADKEGLEMGDE
YFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCK
DEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDSGPSHLSAPSASIGGCKPPSS
EDTPKNKVATWLSCNNVSDGSFADSDSRSSFRTSEGGDGRAGGGRGDGEKPSISGAGVKE
EGDSKPPKKEEPDEQNKILLPSESSRNFGYNPSPLKIEGIKCPPSKTNMHQARRLVGPAQ
ANPDDVLTLSSSTESEGESGTSRKPIAGQAPATAADSDDIQTISSGSDGEDFEDKKNLSG
PIKRQVAVKSTRGFALKSTHGIAIKSTNMASADKGESAPVRKNTRQFYDGEESCYIIDAK
LEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVE
GKELLCCCGAIECRGRLL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccttcctgggtgttttggtttgggtgctgccgcagcagctgggatggaacct
caggagattgccgagctgcagcaggctgtggtggaggagctgggcatctccatggaagaa
cttcgacagtttattgatgaggagctggaaaagatggactgtgtgaagctgcgaaagaaa
cagttggctgaactggaaacctgggtggtgcagaaagagtctgaggttgcccacgttgat
gagcttttcgatgaagcatccagggcagtgactaactgtgaatctctagtgaaggatttc
tactccaaactggggctgcagtatcgagagagcagttctgaagatgaagcctccaaaccc
acagaagtaattgagattcctgatgaggatgatgatgtcctgagtgtcgattcaggtgat
gcaggcaataggaccccaaaggaccagaagcttcgagaagctatggctgccctgaggaag
tcagcccaagatgtccaaaagttcatggatgcggtcaacaagaagactagttcccaggac
ctgaacaaaggagccttgagtcaagtacctgttgagttgagtaaggatggtgacctcgtt
gtcagcatgagaatcctgggcaagaaaaggaccaagacatggcacaagggaaccctcatt
gccatccagacagttgggtctgggaggaagttcaaagtcaaatttgacaacaaagggaag
agcctgttgtctgggaaccatattgcctatgactatcaccctccagcagacaagttgtat
gtaggcagccgtgtggtggccaagtataaggatgggaatcaggtctggctctatgctggc
atcgtggctgagactccaaatgtcaaaaacaagctcaggtttctcatcttctttgatgat
ggctacgcgtcctatgtcacacaatctgaactctatcctatttgcagaccattgaagaaa
acatgggaggacattgaggacatttcatgccgagacttcatcgaagaatatatcactgcc
taccccaaccgtcccatggtgctactgaagagtgggcagctcataaagactgaatgggaa
ggcacttggtggaagtcacgggtagaagaggtggatgggagtcttgtcaagatccttttc
ctggatgacaagcggtgtgaatggatctatcgaggatctacccgactagaacccatgttc
agcatgaagacatccacagcttccacactggagaagaaacaggggggacagctccggaca
cgcccaaacatgggtgctgtgaggagcaaaggtcctgtggtacagtatactcaagatctc
actggtactggaacccagttcaagcccctggaaccaccccatactacctccttgcctgcc
ccaacgctgtcccctcaggttgctgatttggaaagtctggagagtcaactcgcccaggca
cggaagcaagtggccaaaaagagcacatctttccggctaggttctgtgggttctggtcat
tcatcccctacgtcccctgggcttaatgaggcggtccctggcgggaagtctggagttggc
cagacagtcagattaacaccaggctctgtggcccctggcccaaccttcccggcttttcac
ggcatgctggagcgggctccagccgaaccctcctatcgggccccaatggagaagctcttc
tacctgcctcacgcctgtagtcacacctgcctcactcgagtgaggccagtgagtaatgca
cagtacaggggcaagaaccccctcttggttcctctgctctatgattttcggcgcatgaca
gccaggcgccgggtcaaccgcaagatgggctttcacgttatctataaaacaccctgtggc
ctctgcctgaggacaatgagtgagattgaacgctatctctttgagacaacctgtgatttc
cttttcttggagatgttctgtttggacccatatgttcttgtggatcggaaattccagcct
tataagcctttttactatatcctggacatcacccatggccaagaggatgttcctctgtca
tgtgtcaatgagattgatactaccccaccaccacaggtggcctatagtaaagagaggatc
ccagggaagggtgtcttcatcaacactggctgggagtttcttgttggctgtgactgcaaa
gatggctgtcgagacaagtctaaatgtgcttgccaccagcttaccatccaggcaacagcc
tgcaccccagggggccagatcaaccccaactctggctaccagcataagagactagatgag
tgcctacccacaggggtgtatgaatgtaacaagcgctgcaaatgtaacctgaacatgtgc
acaaaccgcttggtgcagcatgggctacaggttcgcctgcagctcttcaagacacagaac
aagggctggggcatccggtgcttggatgacatcgccagaggctcctttgtctgtatctat
gcaggcaaaattctcactgatgactttgcagacaaggaaggtctagaaatgggggatgag
tactttgcaaacctggaccatattgaaagtgtggagaactttaaggaaggctacgaaagt
gatgccccctgctcctctgatagcagtggtgtggacttgaaggaccaagaggatggcaac
agtggcactgaggaccctgaagagtctaatgatgacagttcagatgataacttttgcaaa
gatgaggacttcagtaccagttcagtctggcgcagttatgccacccggcggcagacaaga
ggccagaaagagaatgggttgtctgagacggcctccaaagactcccgccccccagactct
ggcccttcccatctttctgccccctcagcttccataggggggtgtaaacctccttcctcc
gaggacacacccaagaacaaagtggccacatggctaagctgcaacaacgtcagcgacggc
agctttgctgactcagatagccgctcctccttcaggaccagcgagggcggggatgggagg
gctgggggaggccgtggggatggagagaagccttccatctcaggggcaggggtcaaagaa
gagggggatagcaagccacccaagaaagaggagcctgatgaacagaataaaattttgttg
cctagcgaaagttccaggaattttggttacaacccatcacccttgaagattgaaggtatc
aagtgcccacctagcaagaccaatatgcatcaggcccggaggcttgtggggcctgcccaa
gccaaccctgatgatgttttgacactgtccagcagcacagaaagtgagggggaaagtgga
acaagccgaaagcccattgccggtcaggctccagctacggcagcagacagtgatgacatc
cagactatctcatctggctctgatggcgaggattttgaagacaagaagaacctgtctggc
ccaatcaaacgtcaggtggctgtgaaatccacacgtggttttgctttaaaatcaacacac
ggcattgctatcaagtcaaccaatatggcgtctgcagacaagggcgagagcgcacctgtc
cgcaagaatacacgccagttctatgacggcgaggagtcttgctacatcattgatgccaag
ctagagggcaacctaggccgctatctcaaccacagctgcagtcctaacctgtttgttcag
aatgtcttcgttgacacccatgaccttcggttcccttgggtggctttctttgccagcaag
aggatacgagctgggacagagctgacctgggactataactatgaggtgggcagtgtggaa
ggaaaggagctgctgtgctgctgtggggccatagagtgccgaggacggcttctttaa
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