Trametes versicolor: TRAVEDRAFT_137083
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Entry
TRAVEDRAFT_137083 CDS
T04795
Name
(RefSeq) DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tvs
Trametes versicolor
Pathway
tvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRAVEDRAFT_137083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_137083
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
TRAVEDRAFT_137083
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TRAVEDRAFT_137083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF2114
Motif
Other DBs
NCBI-GeneID:
19408950
NCBI-ProteinID:
XP_008045467
JGI:
137083
UniProt:
R7S9I9
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MVAPPEKYAHLNALNDHLGTEPDKLDVMFCGINPGKRSATIGHHFAHPTNHFWRCLHGAQ
LTDRLLDATEDGILPESYQLGLVRQVLAVTQQAAELADTEYTAGVPALLRKIVLLRPCMV
CFVGKQIWESFIKAAAPRPTGSRGSTPSAGITSAERGVHTEVKRVPKPPLAFDLQPYKVV
HSDRESLTHSIRQSDARVRETLFFVVVSTSGLVAGYQRPEKIKQFQLLKQRVDELKSCSL
DTSDMTIIPIPPDLL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgccccctgaaaaatatgcgcatctcaatgcgttgaacgaccaccttggaaca
gagccagataagctagacgttatgttttgcggtatcaatccagggaagaggtctgcgact
attgggcaccatttcgcccaccctacgaaccacttctggaggtgtctgcatggtgcacag
cttactgaccggcttctggatgcgacggaagacggaatactccctgagagctaccagctc
ggcttggtgcgccaggtcttggctgttactcaacaggcagctgagctagcagacaccgag
tataccgccggtgtgccggcactgttacgcaagatcgtgctcctgcgaccatgcatggtg
tgttttgtcgggaagcagatatgggaatcctttatcaaggctgccgcaccgcgtcccact
ggttctcgcgggtccacgccatcggccgggatcacatcagctgagcgaggggtgcacacg
gaagtaaagcgagtcccgaagccgccgcttgcgttcgacctgcagccgtacaaggtggta
cactcggaccgtgagtctctcacccattcaatccgacaatctgacgcgcgagtgcgggag
accttgttctttgtcgtcgtaagtacatccggacttgtcgcaggctaccagcgcccagag
aaaatcaagcaattccagcttctcaagcagcgcgtagacgagctcaagagttgctctctg
gacacctctgatatgactattataccgatccctccagacctactttga
DBGET
integrated database retrieval system
