Trametes versicolor: TRAVEDRAFT_67940
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Entry
TRAVEDRAFT_67940 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_67940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_67940
Spliceosome [BR:
tvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRAVEDRAFT_67940
Complex C
U5 SnRNP specific factors
TRAVEDRAFT_67940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
SRPRB
Motif
Other DBs
NCBI-GeneID:
19418914
NCBI-ProteinID:
XP_008032669
JGI:
67940
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MASFEDYDEFGNYIGGDLDSDEEVEELQQQSQFAPQPEVQPLEGFDEEPAQDDMALMEVD
EPIQNAVVLHEDKKYYPSASEVYGEEVETLVQEEDAQPLTQPIVAPIKVRKWTVEEKDMP
ETRFDKSFLLNMTGFPEFVRNVAVVGHLHHGKTALLDMLVFETHKLTWNSDHPTRYTDTH
VLSRDRDISIKSGPMSLVLPNSYGKSHLVHLIDTPGHVNFVDEVASAIRLVDGVLLVVDV
VEGVMCNTEAIIRHALQEGVKITLVVNKIDRLILELRIKPADAYYKIKHTIEEINTFISG
INPDPELRLSPENGNVAFASTDMAWCVTLRSFAQMYADTYGSVDVNAFADRLWGDIWFNN
ETRKFSRKPADPEANRTFVHFILEPLYKLYSHVLSEETEPLKETLAALGISLKPIMYKMD
VRPLLKVVLSQFFGPSVGLVDMITEHIPSPVEATRSKVLGTYTGPMSSELAQVMQECNPE
GPLMIQISKLYHTTDAQHFRAFGRVISGTVRKGMDVKVLGEGYSPEDEEDMVKAQIEDIW
ITESRYHIPAEEVPAGNLVLLGGVDASIFKSATIAAVDIDDDLHIFRPIKHMTQSVLKIA
IEPIAPSELPKMLSGLRSVNKSYPLVSTKVEESGEHVVIGTGELYLDCVMHDLRRLFSEI
EIKVSDPVTKFAETVLETSALKCYADTPNKKNRLTMIAEPLERGIAEDIETGRVNMRMTA
KERGKFFEEKYQWDLLASRSIWAFGPDDSGPNILLDDVLPSQVDKKLLGTVKEHIKQGFQ
WGTREGPLCDEPMRNVKFRILDASLAQEPIYRGGGQIVPTARRVCYSSFLMATPRLMEPI
YYVEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFETDLRTAT
QGQAFCLQTFDHWSIVPGDPTDTSIKLRPLEPASGQALARDLVLKTRRRKGLGDQISVSK
YLDDEFILALSASGHADLLG
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcgaggattacgacgagttcggaaactacatcggcggagaccttgactcc
gatgaggaggtggaggagctccagcagcagtctcagttcgcgccccaaccagaggtgcag
cctctggaggggttcgacgaggagccggcacaagatgacatggcccttatggaagtagac
gagccgatccaaaatgcggtcgtactacacgaggacaagaagtactatccgtcggcgtct
gaggtatacggcgaggaagtcgagacgttggtccaggaggaggacgcgcaaccactcaca
caacctatcgttgcgcctatcaaagtgcggaaatggactgtggaggagaaagatatgccg
gagacccggttcgacaagagcttcctgctcaatatgacaggcttccctgagtttgtgcgg
aatgttgctgttgttggtcacctgcaccacggaaagaccgcactgttggacatgctcgtg
tttgagacacataagctgacatggaattcggaccacccgacccggtacacagatactcac
gttctttcccgggaccgagatatctccatcaagtccggtcctatgtccttggtcttgccc
aacagctacgggaagtctcacctagtccatctcattgacactcccggacacgtgaacttc
gtcgacgaggttgctagtgccattcgcttggtagacggtgtcctcttggtggtcgacgtt
gtggaaggggtcatgtgtaatactgaggcgatcatccgacatgcgctccaagaaggtgtc
aaaatcaccctcgtcgtgaacaagattgacaggctaatccttgagctgcgcatcaagcct
gctgatgcgtactacaaaatcaagcacaccattgaggaaatcaacaccttcatcagcggt
atcaaccctgacccagagctgaggctcagccccgagaacggaaacgttgcattcgcgagc
actgacatggcttggtgcgtcaccctgaggtcctttgcgcagatgtatgcggacacatac
ggctctgtggatgttaacgctttcgcggaccgcctatggggcgacatttggttcaacaac
gagacgcgtaaattctcgcgcaagcctgccgaccctgaggcaaaccggacatttgtgcac
ttcatcctggagcccttgtacaagctgtatagccatgtgctcagcgaggagactgagccg
ctcaaggagacactggcagccctcggcatctcgctgaagcctatcatgtacaagatggac
gtgcggcctctcctgaaggttgtactcagccaattcttcggtccctcggtagggctggtg
gacatgatcaccgagcacatcccatctccagtggaagctacccggtccaaggtcctagga
acttataccggccccatgtcgtctgaactggctcaggtcatgcaggagtgcaatcccgag
ggccctctcatgatccagatctccaagctctaccacacaaccgacgcccagcacttccga
gcattcggccgtgtcatcagtggtaccgtccggaagggcatggatgtgaaggtgctcggt
gaagggtattcgcccgaagacgaggaggacatggtcaaggcgcagatcgaggatatctgg
atcaccgaatcacggtaccacatcccggcagaagaggttcctgcgggcaacctcgtcctg
ctcggcggcgtagacgcgtctatcttcaagagtgcaacgatcgcagcagtggatatcgac
gacgacctgcacattttccgcccaatcaagcacatgacgcagtcagtgcttaagatcgcc
attgagcccatcgcgccttcagagctaccgaagatgctgtcaggcctccggagtgtgaac
aagagctaccctctagtgtcgacgaaggtcgaggagagcggagagcacgtcgtcatcggc
acgggcgagctgtacctggactgtgtgatgcacgacctccgaaggctgttctccgagatc
gagatcaaggtgtcggacccggtcacgaagttcgcggagacggtgctcgagaccagcgcg
ctgaagtgctacgcggacacgcccaacaagaagaaccggctaacgatgatcgcggagcct
ctggagcgcggtatcgcggaggacatcgagaccgggcgcgtgaacatgcgtatgacggcg
aaggagcgcggcaagttcttcgaggagaagtaccagtgggacctgctcgcgtcgcggtca
atatgggcgttcgggcccgacgacagcggaccgaacatcttgctggatgacgtgctgccc
tcgcaggtcgacaagaagctcctcggcacagtcaaggagcacatcaagcagggcttccag
tggggtacgcgtgaaggccccctgtgcgacgaaccgatgcggaatgtcaagttcaggatc
cttgacgcaagtctggcgcaagaaccaatctaccgcggcggtggacagattgtgcccact
gctcgccgcgtctgttactcgtcgttcctgatggctacacctcgattgatggagcccatc
tactacgtcgaggtgcaggccccggcggactgtatatcggctgtatacacggtgcttgcg
cggcgccgtggtcacgtcacacaggatatcccgaaggcaggctcgccgctgtacacggtg
aaggcgctgattccagtcatcgacgcgaacgggttcgagacggaccttcggacggcaacg
cagggtcaggcgttctgtctgcagacgttcgaccactggtctattgtgcccggtgatccc
acggacacgagtatcaagctccggcccctcgagcccgcgtccgggcaggcactcgcgcgc
gaccttgtgctgaagacgcggcggcgcaagggtctgggagaccagatttcggtgtcgaaa
tacctggacgacgagttcatcctcgcactatctgcgtcggggcatgcggatctgcttggc
tga
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