Terrisporobacter vanillatitrophus: TVTCOM_36490
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Entry
TVTCOM_36490 CDS
T11160
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TVTCOM_36490 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvt03400
]
TVTCOM_36490 (pdg)
Enzymes [BR:
tvt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TVTCOM_36490 (pdg)
DNA repair and recombination proteins [BR:
tvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TVTCOM_36490 (pdg)
Prokaryotic type
TVTCOM_36490 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Ogg-HhH
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
XAM53529
LinkDB
All DBs
Position
complement(3738582..3739208)
Genome browser
AA seq
208 aa
AA seq
DB search
MKDVNKILDKLETIYPDAHCELEHTTAFELLIATILSAQCTDVRVNMVTRELFKKYNTPE
DFANLSEEKIMEEIKTCGLYKSKSKKIKATSEMICRDYNGEVPDTLEELTKLPGVGRKTA
DVVLSNAFNKDAIAVDTHVFRVSNRIGMVHTKTPEKTEFALMDVIPKHRWSHSHHVLIFH
GRRMCKARKPQCELCPIKDNCDFYQGKE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtaaataaaatattagacaagttagagacaatttatccagatgctcattgt
gaattagagcatactacagcttttgaattattaatagctactatattatctgcccagtgt
actgatgttagagttaatatggtaacaagggaactttttaagaagtataatacgccagag
gattttgcaaatttatcagaagagaaaataatggaagagataaaaacttgtggtctttac
aaaagtaaaagtaaaaaaattaaggctacatcagaaatgatatgtagagattataatggt
gaagttccagatactttagaagaactaacaaaacttcctggtgtgggaagaaaaacagca
gatgtagtattaagcaatgcatttaataaagatgctatagcagtagatacacatgttttt
agagtttcaaataggataggtatggttcatacaaaaactccagaaaaaactgagtttgct
cttatggatgttataccaaaacataggtggtctcattctcatcatgtattaatatttcat
ggcagaagaatgtgcaaggcaagaaaaccacaatgtgagttatgcccaataaaagataat
tgtgatttttatcaaggaaaggaatga
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