Tripterygium wilfordii (thunder duke vine): 119996184
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Entry
119996184 CDS
T07256
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119996184
09123 Folding, sorting and degradation
03018 RNA degradation
119996184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119996184
03041 Spliceosome [BR:
twl03041
]
119996184
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119996184
mRNA degradation factors
5'-3' decay
Lsm complex
119996184
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119996184
Complex C
U2 snRNP components
119996184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Glutaredoxin
TIG_SUH
RimP_C
Motif
Other DBs
NCBI-GeneID:
119996184
NCBI-ProteinID:
XP_038698657
LinkDB
All DBs
Position
4:8725762..8729293
Genome browser
AA seq
97 aa
AA seq
DB search
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEETVTTVE
IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagaagagagtgctgtgaaggagccgttggatctgataagattgagtctc
gacgagcgcatttacgtcaagctccgctccgaccgggagcttcgtgggaaactccatgct
tatgatcagcatttaaatatgattcttggggatgttgaagaaactgtcactacagtagaa
attgacgatgaaacttatgaagagattgttcggacaacaaagcgaacagttccatttctc
tttgtcagaggagacggagttatattggtttctcctcccttgaggacagcttaa
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