Tripterygium wilfordii (thunder duke vine): 119998321
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Entry
119998321 CDS
T07256
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119998321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119998321
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119998321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_15
AAA
Arf
AAA_23
AAA_30
nSTAND3
ORC-CDC6-like
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
119998321
NCBI-ProteinID:
XP_038701550
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Position
5:8767308..8770247
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AA seq
329 aa
AA seq
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MGVMEGRKPTIELNGLKFTYPGIDGHPPPGSTPLIGDFSLTLNTGDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTALTASGDLCYLGGEWRRDVAFAGFEVSIQMDIS
AEKMIFGVAGVDPQRRAELIKVMDIDLSWRMHKVSDGQKRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLRKECQERGATIIYATHIFDGLENWPSYIVYVAHGKLQLAMPMDE
VKEISSLSLMKTVEAWLRKERDEERLMRKERKARGLPEFEKRMEESRVTGDPACAAVRVI
NNGWAAGRLHSTVAGEENFVLSSNRVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcatggagggaagaaagccaacgatagagctcaatggcctgaaattcacttac
ccaggaatcgacggccatccaccgcctggatctactcctttgatcggcgatttctctctc
actctcaataccggcgaccgatgtcttctcgtcggatccaatggcgctggtaaaactact
attctgaagatattgggaggaaagcatatggtggagcctcacatggtgcgtgtattggga
agatccgctttccacgacaccgctttgacagcttctggtgatctctgttatcttggagga
gagtggaggagggatgtcgcttttgcagggtttgaggtttccatacagatggatatttct
gcggagaaaatgatatttggagttgcaggtgttgaccctcaaagaagagctgaacttatc
aaagtaatggatattgatttgtcttggagaatgcacaaggtatctgatggtcagaaaaga
agagtgcaaatttgtatgggtctccttaagccattcaaggttctccttcttgatgagata
acagtcgaccttgacgtgctggcaagggctgaccttttaaagtttctcagaaaggaatgt
caagagcgaggggccacaattatctatgctacccacatattcgatggcctagagaattgg
ccatcatatattgtgtatgtagctcatggcaagctgcaattggcaatgccaatggatgaa
gtgaaggagattagcagcctatcactgatgaaaacagtggaggcttggttaaggaaagaa
agagatgaagagaggttgatgagaaaagaaagaaaggcacgcggcctacccgagtttgaa
aaacgaatggaggaaagccgtgttactggtgatccagcatgtgctgctgttcgtgtaatt
aacaacggctgggctgcaggaaggctgcactctactgttgccggtgaagaaaatttcgtc
ctcagctcgaacagagttttgagacagtag
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