Tripterygium wilfordii (thunder duke vine): 119998885
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Entry
119998885 CDS
T07256
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119998885
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
119998885
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
Adaptin_N
PDS5
CEP104-like_TOG
MMS19_N
Motif
Other DBs
NCBI-GeneID:
119998885
NCBI-ProteinID:
XP_038702283
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All DBs
Position
5:9957159..9966117
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AA seq
948 aa
AA seq
DB search
MQKQFLAACKSSANTDKPLSLQTLASFRSHIINPHTSDTTISVIVETLTRFLQLSCDASA
LHHTLKLLGDLASCRPNLTSLIFDSVRSKLFSSAESTLLSTYSLAVLASISNLNPNLTIG
VDHQFFVSLCFGPCVSARLWLLRNAERFVPRPYVLFPVFLGFTKDPFPYVRKVALDGLVR
LCNSGFVFNDQYMVEGCYCRAVELLRDEEACVRAAAVRVIGGWGHILSASCQMENATEWP
DAVFVQLCSMVRDMSMEVRVEAFKALGRIGIVSDDLLLQTLSKKVLGKIKENKFLLNCAA
DWFKISASSAAGAFMHGLEDEFYQVRKSACHSLRTFAIFSSVFASEALNLLMDILNDDSV
DVRIEALQTMLHMATCEHLKVQEMHMHMFLGNLVDNSTSIRSTTRKILRLVKLPNYELFK
LSVDGLLENLEKYPQDEADVFSVLFYMGQSHGNFVVCIINEIIEEIEPVSDGYDSVRAAA
FLVLAISAPLSNEKYLYDIPPRIFSYAVTFLGKISRALCGVTSQKFLLAYLSQCSRYSNS
FDVEFKDEETSLSVVQDHIQGHTSTSSSNAVTRALLPMGDETSEVQSQRLLEPTLVADSC
LEDHLDKEDQVMKFVNSILAKVKDIWLLVHAGRSLEALRSLRACKEELSTFSSETLGSAD
ALAFTLQYLRMVKLLAKIWEHFLPAMRLSSTGIGELELLFGKLDSFLRGMRCRFIGLSNK
EVLHFLEVIVVTYVLRLSKVEICCCLTTRKKLSATISLIESLLKEGSIEPSDFIVEVTNS
LHELSTSTSGTSCGPFLFNKLIDLFYLKQLTLSGRLSHVKAELDVPDNCSQKPLSFIPGL
PVSIPLDITLCNILSESRLWLKIWSQESIQFVFLDFDILGGGDEMKKFTFVAPFYPTPKA
VCFALMVCVGMECLDEDLQLVKCRGGPKHALTYLCPEKEVYLSMVSKD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcagttcttggccgcatgcaaaagctcggccaacaccgataagcctctctct
cttcaaaccctagcctcctttaggtctcacataatcaaccctcacacctctgataccaca
atatctgtgatcgtcgaaaccctaactcgctttctccagctgagttgtgacgcctccgct
ttgcaccacactctcaagctcctcggagaccttgcctcttgccgtcccaacctaacttct
ctaatcttcgactcggttcgctccaaattgttcagttcggctgagtctactcttctgtcc
acgtattcactagctgtgctggcttcaatttctaatctcaaccccaatttgacgatcggt
gtcgaccaccagttttttgtttccctatgctttggtccgtgcgtgtccgcgcggttgtgg
ctccttagaaatgccgagaggtttgtcccgaggccatacgtgttgttcccggtgtttctt
ggcttcacgaaggatccatttccttatgtgaggaaagttgctttagatggacttgttaga
ttgtgcaactctggctttgttttcaatgatcaatatatggttgagggatgctattgtcgt
gctgttgagcttctacgtgacgaggaagcttgcgtgagagctgctgctgttcgagtgatc
ggtggatggggtcatatactttcagcttcttgtcagatggaaaatgcaacagaatggcca
gatgcagtatttgtccagctctgttctatggtaagagatatgagtatggaggttagggtc
gaagcatttaaagcccttgggaggataggaattgtatctgatgacttattgctacaaact
ttatccaaaaaggtattggggaaaattaaagaaaataaatttcttcttaattgcgctgct
gattggtttaaaatatcggcatcaagtgctgcaggagcttttatgcatgggcttgaggat
gagttctatcaggtgcgaaagtctgcctgtcactccctgcgtacctttgcgattttttct
tctgtgtttgctagtgaagccctaaacctgttgatggacattctgaatgacgattcagtg
gatgtcaggatagaagctttgcagacaatgcttcatatggccacttgtgagcatttaaag
gtacaagagatgcacatgcatatgtttcttggcaatctagttgataatagtacttccatc
agatccactacaaggaaaatacttagattggtgaagctgcctaattatgagttgtttaaa
ctatctgttgatggccttcttgaaaacttggagaaatatcctcaggatgaagctgatgta
ttctctgttttgttttatatgggtcaaagccatggaaactttgtggtctgcattatcaac
gagattattgaagagatagaacctgtttctgatggctatgatagtgtcagagcagctgca
tttctagtactagccatctctgctccactttcaaatgaaaagtatttatatgatattcca
cctagaattttttcttatgcagttacgtttctagggaagatctctcgtgcattatgtgga
gtcacaagccaaaaattccttttggcatacttgtctcagtgcagtagatattctaattct
ttcgatgtagagttcaaagatgaggagacctcattgtccgtggttcaagatcatattcaa
ggtcatactagcacatcaagttctaatgctgttacgagggctctgctgccaatgggtgat
gagacttctgaggttcagtcccagagattattagagccgacattggtagccgattcatgt
ttagaagatcacctggacaaggaggaccaagtaatgaagtttgtgaattcaatcctcgca
aaggtcaaagatatttggctgctggtacatgcaggacgctcacttgaagccttacggagt
ttgagggcttgcaaggaagagttgtcgactttcagtagtgagacacttgggtctgcagat
gcattagcatttacgttgcagtatctccgaatggtgaaactgcttgctaagatatgggag
cattttttacctgcaatgaggctaagctccactggcattggggagttggagcttctattt
ggaaaactggacagctttctcagaggaatgaggtgtagatttattgggttatctaacaaa
gaggttttgcatttcttagaggtgatagttgtgacctatgttttgaggttatccaaagtc
gaaatttgctgctgccttactacaagaaaaaaactttctgccactatttcactcatagaa
agtctcctgaaagaaggatccattgagccttctgattttattgttgaagttacaaactct
ttgcatgagcttagcacttctaccagtggcacatcctgtgggccattcctttttaataag
ttaattgacttgttctaccttaagcaattaaccttatctggcagactgagtcacgtgaag
gcagagctagatgttcctgataattgttctcagaaacctctttctttcatcccgggacta
ccagtttctataccattagatattactctctgtaatattttgagtgagagtaggctgtgg
ctgaaaatatggagtcaggagtcaattcagtttgtctttttagatttcgacatactagga
ggcggtgatgagatgaagaaatttacttttgttgcgcccttttatccaactccaaaggct
gtttgttttgcattaatggtttgtgtgggcatggaatgtttggatgaggatcttcaatta
gttaaatgtcgtggaggtccaaagcatgcactaacatatctttgcccagaaaaagaagtt
tacctttccatggtttctaaagactag
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