Tripterygium wilfordii (thunder duke vine): 120002814
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Entry
120002814 CDS
T07256
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04075
Plant hormone signal transduction
twl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120002814
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120002814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
twl03000
]
120002814
Transcription factors [BR:
twl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120002814
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Motif
Pfam:
HLH
bHLH_SAC51
DUF6800
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120002814
NCBI-ProteinID:
XP_038707575
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Position
7:5030407..5034386
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AA seq
237 aa
AA seq
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MECRKCPSEGVERLSSEFGRKQDVRSKRTRSAELHTISERRRRDRIKEKMGELQALIPNC
NKSDKVSILDHAIGYLKALKNQIEMMSKRGGTLCQAPIMSPPEMQSIRYPYQFPAMRPDF
GRGMSFGMGRLSTCYSAGLPMISFPSASLHTFPSAATELHISRPGNFLIPHAQMPRARSE
VLPDPAAPSNMMSYAGFSPAFESSSGGEPSCRDITSLAFHHQHIPTLSQDNSQDFQM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcagaaagtgtccaagtgaaggagttgagaggctgtcttctgaattcgggcga
aaacaagatgttcgttcaaaaagaacacgttcagctgaattgcacaccatatctgagagg
aggcgtagggaccggatcaaagaaaagatgggagagttgcaggcattgataccaaactgt
aacaagtcagacaaagtttcaatactggaccatgctattggatatctcaaagccttaaag
aatcagattgaaatgatgtccaagcgcggaggaactttatgtcaagctccaattatgtca
ccgccagagatgcaaagtatacgatatccctatcagtttccagccatgaggcctgatttc
gggaggggaatgagctttggaatgggaagattgagcacgtgttattcagcaggtcttcct
atgatttcattcccctcagctagtctacacacttttccatctgccgctaccgaactgcat
atttccagacctggaaattttctgattcctcatgcacaaatgccacgcgctcgttcagaa
gtattacctgaccctgctgccccatcaaacatgatgtcttatgcaggattctctcctgca
ttcgagagttcaagtggaggagaacctagttgccgggatataacgagtcttgcctttcat
caccaacatattccaacgctaagtcaggataacagtcaggattttcaaatgtag
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