Tripterygium wilfordii (thunder duke vine): 120005010
Help
Entry
120005010 CDS
T07256
Name
(RefSeq) alpha-farnesene synthase-like
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00909
Sesquiterpenoid and triterpenoid biosynthesis
twl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
120005010
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
120005010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Yme1-like_N
Arg_repressor
Motif
Other DBs
NCBI-GeneID:
120005010
NCBI-ProteinID:
XP_038710358
LinkDB
All DBs
Position
9:1486152..1488942
Genome browser
AA seq
562 aa
AA seq
DB search
MLYAIIMAAQQLLQCKLKSKASDPFQQRRSANYRPNIWSHEFLQSLSNNYDEEQYRSQFG
ELKEHVKRLFIDADDLLSKLELIDSIKKLGLANHFREEIKEALDNIASKNQSTEADLYAT
ALRFKVLRQNGYEVFQDVFSVFVDEEGAFGGKISCDDDTKGIIELFEASHLALEADNILD
EAKAFSTGILETRSCRTESSINKQIVHTLELPYHWRVQWFDVKWYIDGHDHQIEKDSLLE
LAKLNFNVVQNTLQKDLRELSGWWKNLGLIENLSFARNRLVECFMCTAAFAYEPHYNNLR
KWLTKVLIMIAIIDDVYDVYGSLEELHHFTIAVDRWNSSKIQQLPECMKLCFQALIGITN
EVAREMQTENNWSHQVLPHLKKVWADFCKALFVEAKWHKTGHMPSLKEYMNNAWITSSGS
LITVHLLFSTLHEATKEILETNEDLVYNLSIVIRLCNDLGTSAAELQRGDAPSSILYYRR
ENNVPEAIAREHIKGLINETMKKMNAECFGQSALELQPCTNIIMNVARMVHNLYLHGDGF
GVQDGETRRQIASVLVEPFSLV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgctctatgcaattatcatggctgcacagcaacttttacaatgcaagttgaagtctaaa
gcctctgaccccttccaacaaaggcgtagcgcgaattataggcccaacatctggagccat
gaattcctgcaatctctttccaacaattacgatgaagagcagtacagaagccagtttggg
gagctaaaagagcatgttaagagattgtttattgatgcagatgacttattgtctaagtta
gagcttattgacagcataaaaaagcttggtttagccaaccacttcagagaggaaataaag
gaagcccttgacaacatagcatcaaaaaatcaaagcaccgaagctgatctctacgctact
gcactgcgcttcaaggtcctcaggcagaatggttatgaagtttttcaagatgtatttagt
gtatttgtggatgaagagggtgcttttgggggtaaaataagctgtgatgatgatacaaaa
ggaataattgagctatttgaggcctcacatctagcactggaagctgataacatacttgat
gaggctaaggctttctctaccggaatccttgaaaccagaagttgtaggacagaaagtagc
attaacaagcaaattgtacatactttggagcttccatatcactggagggtgcagtggttt
gatgtcaaatggtacattgatggacatgatcaccagatagaaaaggacagtttacttgaa
ttggcaaaattgaacttcaatgtggtccagaacaccctccaaaaagacttgagagagctc
tctggatggtggaaaaatctgggtctgattgagaacttgagctttgccagaaaccgactg
gtcgaatgcttcatgtgcactgcagcatttgcttatgagcctcattacaacaatcttagg
aaatggcttactaaagtactaatcatgatcgcgatcatcgatgatgtttacgacgtttat
ggttcactcgaagaattgcatcatttcaccattgccgttgataggtggaattcaagcaaa
attcaacagcttccagaatgtatgaagttgtgtttccaagcactcattggtatcactaat
gaagttgcaagagaaatgcaaacagagaacaattggagccaccaagtgctacctcactta
aagaaagtgtgggcagatttctgtaaagcactatttgtggaagcaaagtggcacaaaaca
ggacatatgcctagcttgaaagagtacatgaataatgcctggatcacctcatcaggcagt
ttgataactgttcatctacttttctccactctacatgaagccacaaaggaaattctggaa
accaacgaagaccttgtatataatttgtccatcgtaatccgactctgcaatgatctcgga
acttcagcggcggaactacagaggggcgacgctccgtcctcgattttgtattacaggaga
gaaaacaatgtcccggaggcgattgctagggaacacattaaaggcttgataaacgagaca
atgaagaaaatgaatgcagagtgttttggacaatcagcattagagttgcagccatgcaca
aacatcattatgaatgttgctcgcatggtgcacaacctttatcttcatggagatggattc
ggtgttcaagacggcgagacgagaagacagatagcttctgtgctagttgaacctttttca
ctagtatga
DBGET
integrated database retrieval system
