Tripterygium wilfordii (thunder duke vine): 120005063
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Entry
120005063 CDS
T07256
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120005063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120005063
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120005063
Complex C
U5 SnRNP specific factors
120005063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Septin
Ras
Motif
Other DBs
NCBI-GeneID:
120005063
NCBI-ProteinID:
XP_038710425
LinkDB
All DBs
Position
9:complement(526741..532704)
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AA seq
987 aa
AA seq
DB search
MDDSLYDEFGNYVGPEIESDQESDGEDDEELPDQPHEEEVTSDGEGGTSGPNGWITASHD
VDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVKNIKFEVGVKDSS
TYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPNNERHMRYTD
TRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIV
DAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINSHI
TAVSSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDFEKFASRLWGD
IYYHPDTRTFKKKPPSTGGERSFVEFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNA
AYKLNVRPLLRLACSSVFGSALGFTDMLVKHIPSAKEAAARKVDHIYTGPKDSTIYQSMV
DCDPSGPLMVNVTKLYPKPDCSVFDAFGRVYGGKIQTGQTVRVLGEGYSPDDEEDMTVKE
VTKLWIYQARYRIPISSAPPGTWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNTLP
VVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRE
LYSDIEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVS
IDWSRRQLGDFFKTKYEWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLGAVKDSI
VQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLNRGSGQIIPTARRVAYSSFLMATPR
LMEPVYYVEIQTPIDCLSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETD
LRYHTQGQAFSLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSED
VSINKFFDEAMMVELAQQAADIHQQML
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtttgtatgatgagtttggtaattatgttggacctgaaattgagtctgat
caagagagtgacggagaggatgatgaggagcttcctgaccagccccatgaagaggaggtg
acatcagatggtgagggtggaacctccggtcccaatgggtggattactgcctcacatgat
gttgatatggataaccagattgttcttgctgaggacaagaagtattatccaacagcggaa
gaggtttatggtgaagatgttgaaacattggttatggatgaagatgagcaacctttagaa
caaccgataattaaacctgttaagaacatcaaatttgaggtcggggtgaaagattcttcg
acatatgtatcaacccagtttcttataggtctaatgtcaaatcctgctctggttagaaat
gttgcccttgtaggccatctccagcatggcaagacagtattcatggatatgttggttgag
caaacacaccatatgtccacttttgacccgaataatgagaggcacatgagatatacagat
acaaggattgatgagcaagagagaagaatatcaatcaaggctgtcccaatgtcacttgtt
ctcgaggatagcaattcaaaatcatacctgtgtaacataatggacactcctggtcatgtc
aatttctcagacgaaatgactgccgctctcaggctagccgatggtgctgttttgattgtt
gatgctgctgaaggagttatggtaaatacagaaagagccattcgccatgcaattcaagag
cgcttgccaattgtagttgtgattaacaaggttgacaggctgataacagaacttaagttg
cctccaaaggacgcttaccataagctcaggcatacattggaagtgattaatagccacata
actgctgtatcttcaactgctggaaatgtgcaagtcatagatccagctgctggaaatgtt
tgttttgccagtgcaactgcagggtggtcatttactctgcaatcgtttgctaaactgtat
gtaaagctgcatggaatcccatttgactttgaaaagtttgcatctcgtctttggggagat
atctattatcatccagataccaggaccttcaaaaagaagcccccatccactggaggggaa
agatcatttgttgagtttgtactcgagcctctctataaactctacagccaagtgattggg
gaacataaaaagagtgtggaggcaactcttgcagagctcggggtcactctcagtaatgct
gcttacaaattgaatgttaggcccttattaaggttggcttgtagctcagtttttggttct
gccttaggctttacagatatgctggttaaacatataccttctgctaaagaagctgcagcc
aggaaggttgatcatatatacacagggcccaaagattcaacaatttatcagtcaatggta
gattgtgatccttctggtcccttgatggttaatgtgactaaactgtatccaaagcccgat
tgcagtgtttttgatgcttttggtagggtctatggtggtaagatccagacggggcagact
gtgcgtgtgcttggagaaggctattctccagatgatgaggaagacatgacggtgaaagaa
gtaacaaaactatggatttatcaggctcgatataggatacctatatcaagtgctcctcca
ggtacgtgggttctcattgaaggcgtggatgcttctataatgaagactgcgactctctgt
aatgttgattacgatgaagatgtgtatatatttcggcctcttcagttcaatactcttcca
gtagtgaaaacagctacagagcctctaaatccaagtgaattgccaaaaatggtggaaggt
ctcaggaagatcagcaaaagctatcctttggccattactaaagttgaggaatctggggag
cacactattttaggcactggagaattgtacctggattcaatcatgaaggatcttagagag
ctctattctgatatagaagtgaaggtggcagatcctgttgtttcattttgtgagacagtg
gttgagtcctcatcaatgaagtgttttgctgaaacaccaaataagaagaataaaataacc
atgatcgcagaaccattggaaaaggggcttgcagaggacattgagaatggtgttgttagc
attgattggagtcgaagacagcttggtgacttctttaagacaaaatatgagtgggatttg
ctcgcagcacgatctatatgggcatttggccctgataaacagggacctaatatcttatta
gatgatacacttcccactgaggttgacaagagcttgctgggtgcagtcaaggattccatt
gttcaaggattccaatggggtgctcgagagggtcccctctgcgatgagcctatcaggaat
gtcaagtttaaaatagttgatgcaaggattgcacccgaaccattgaatcggggatcaggt
caaatcatacccacagctcgacgtgtggcctattcttccttccttatggcaacccctcga
ctaatggagcctgtgtattatgtggagatacaaacaccgattgactgcctatctgctatt
tatacggtgttgtctcgtagacgtggacatgttacagctgatgttcctcagccaggcacc
ccagcatacattgtgaaggcatttttacctgttattgaatcatttggttttgagacggat
ttgaggtaccatactcagggccaagcattttccctctcagtgtttgaccactgggctatt
gttccgggggatccactagataagagcatagttctgcggccacttgaaccagcacccatc
cagcaccttgctcgtgaatttatggtgaagacaaggcggagaaagggaatgagcgaagat
gttagcatcaacaagttctttgatgaggctatgatggtggagctggctcagcaggcagct
gatattcatcagcagatgctatga
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