Tripterygium wilfordii (thunder duke vine): 120009362
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Entry
120009362 CDS
T07256
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120009362
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
twl01007
]
120009362
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twl03016
]
120009362
Enzymes [BR:
twl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
120009362
Amino acid related enzymes [BR:
twl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120009362
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120009362
Prokaryotic type
Other AARSs
120009362
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
120009362
NCBI-ProteinID:
XP_038715849
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Position
11:10311701..10331167
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AA seq
1176 aa
AA seq
DB search
MDEVCEGKDFSFPNEEERILQFWSDIKAFETQLKRTENLPEYVFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVENAIDKKLNIKRRDEVLTMGIDKYNEE
CRSIVTMYVEEWEKVISRTGRWVDFKNDYKTMDVKFMESVWWVFSQLYEKGLVYKGFKVM
PYSTGCKTPLANFEANLNAKLTPDPEITVTFPIIDDAHNAAFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKYSGKIYVLAESLLSALDTEKSKSDVANGPGSSKTSSSKTKGSSGGKSE
VQANSYEVLEKIPGSSLVGMKYEPLFSYFMEFSNVAFRVVADNYVTESSGTGIVHCAPAF
GEDDYRVCIENEIISKGDNLIVPVDDDGCFTGKITDFSGRYVKDADKDIIEAVKAKGRLV
KSGTCTHSYPFCWRSQTPLIYRALPSWFVRVEELKEQLLENNKQTYWVPDYVKEKRFHDW
LENARDWAVSRSRFWGTPLPVWISDDGEEVIVIDSVDKLEKLSGVKVFDLHRHNIDHITI
PSSRGPGFGVLRRIDDVFDCWFESGSMPYAYIHYPFENIELFEENFPGHFIAEGLDQTRG
WFYTLMVLSTALFGKPAFRNLICNGHVLAEDGKKMSKSLKNYPSPMEVINDYGADALRLY
LINSPVVRAETLRFNKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGLAPFVPTNLASL
QNSANVLDQWINSATQSLVHFVRQEMDAYRLYTVIPYLLKFLDNLTNIYVRFNRKRLKGR
TGEDDCRIALSTLYNVLLTSCKVMAPFTPFFTEALYQNLRKVCNGLEESIHYCSFPQEEG
KRDDRIELSVARMKTIIDLARNIRERHSKPLKSPLREMIVVHLDTDFLDDITGKLREYVL
EELNVRCLIPCNDTLKYASLRAEPDFSALGKRLGKSMRAVEEEVKAMSLGDILAFEKNGE
VTIATHRLMPTDIKVVREFKRPAGLTKKEIDANGDGDVLVILDLRPDESLFEAGVAREVV
NRIQKLRKKAALEPTDMVEVYFNSLDDEKSSVEQVLKSQELYVRDTVGSSLLPYAKMAPH
AVILYEESYHGIYNLSFTITLARPALVFNSETILALYAGEKRYAHNLEIYLLSKDHSYLK
SEFKRGNGKITVDCIENQPAVEVELRKHVFLTVGDS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggtgtgtgagggaaaggacttctccttccctaatgaggaggagcgaatcctc
caattctggtcggatatcaaggcattcgagacccagctcaagcgcacggagaatctcccg
gagtacgtcttctacgatggcccgcctttcgccactggcctcccgcactatggccatata
ctcgccgggacaattaaggatattgtcactcggtatcaaaccatgatcggtcaccatgtc
acccggcgttttggctgggactgccatgggctacccgtcgagaatgccattgacaagaag
ttgaacatcaagaggagggatgaggtgctgacgatggggatcgacaagtacaatgaagag
tgcaggagtattgtaactatgtatgtggaggagtgggagaaggtaattagcaggactgga
agatgggttgacttcaagaatgactataaaaccatggatgtgaagtttatggagagtgta
tggtgggtcttttcccagctttatgagaagggtctcgtatataaaggtttcaaggtcatg
ccatacagcactggttgcaagactccactagctaattttgaagccaatctgaacgctaag
cttactcctgatcctgaaataacggtgacatttccaattattgatgacgctcataatgct
gcttttgttgcttggacaaccactccatggacccttcctagtaaccttgccctttgcgtc
aatgcgaattttgtatatgtgaaggttcgcaacaaatactctggaaaaatatatgtgctt
gctgaatctctgctgtcagcacttgatactgagaagtcaaaatcagatgtagctaatggt
cctggtagttccaagacatcaagttctaagaccaagggttcttctggtggaaaatctgaa
gttcaagctaattcatatgaagtgctggagaaaatccctgggtcttcactcgtgggaatg
aagtacgaaccattgttcagttacttcatggagttctctaatgtagcatttagagttgtt
gcggacaattacgtaactgaatcaagtggaactggaatcgttcactgtgctccagcattt
ggtgaagatgattatcgagtctgtattgaaaatgaaataattagtaagggggataatttg
atcgttccagttgatgatgatggttgttttactggaaaaattaccgattttagtggtcgc
tatgtcaaggatgctgataaggatattattgaagcagtgaaggcaaagggcaggcttgta
aagtctggaacctgtacacattcatatcccttttgttggagatctcaaactcctctgata
tacagagctcttccgagttggtttgttcgagtggaagagttaaaagagcaattgttagag
aataacaaacaaacttattgggtacctgattatgtgaaggaaaaacgcttccacgattgg
ctggagaatgcgagagactgggctgttagtcgaagtagattttggggcactcctcttcct
gtatggataagtgatgatggggaggaagtcatagtcattgattctgttgacaaacttgaa
aaactttctggtgttaaggtgtttgatttacatcgccataacattgatcatattactatc
ccatccagtcgtggtcctggatttggtgtgcttcgacgtatagatgatgttttcgattgc
tggtttgaaagtgggtcaatgccatatgcgtatatccattatccatttgagaacattgaa
cttttcgaagaaaattttcctggacattttatcgcagagggtttagatcaaactcgtgga
tggttctatacgctcatggtgttgtctacggccctatttgggaagcctgcattccggaat
ctaatttgtaacgggcatgtcctggcagaggatggaaaaaagatgagtaaaagcctgaaa
aactatccttcaccaatggaagtaattaatgattatggagctgacgctttacggttatac
cttataaattctcccgttgtgcgtgcggaaaccttgcgattcaacaaggaaggagtgttt
gctgttgtcaaagatgttttccttccatggtataatgcatatagattccttgttcaaaat
gccaagcgacttgaaattgatgggcttgcaccctttgttcccaccaatttagcctctctt
caaaattcagctaatgtgcttgaccagtggattaactcggctactcaaagccttgttcat
tttgtacgccaagaaatggatgcatatcgactttacacggttattccatacctcttgaag
tttcttgacaaccttacaaatatatatgtgcgcttcaatcggaagagactaaaaggccgt
actggcgaagatgactgtcggattgctctctcaactctttacaatgtgctcctgacatcg
tgcaaggtgatggcaccatttacaccattcttcactgaagctttatatcagaatttgcga
aaagtatgcaatgggttagaggaaagcattcactactgcagcttcccccaagaagaggga
aagagggatgaccgtattgaactaagtgttgcaagaatgaagaccataattgaccttgcc
cgcaatattcgtgagcgtcacagcaagcctcttaaatcacctctcagggagatgatagtg
gttcacctagacacagactttcttgatgatataactggaaagctgagagagtatgtgctc
gaggaactcaatgtaagatgtctcatcccatgcaatgataccttgaagtatgcttcccta
cgtgctgagccagattttagtgcattaggaaaacgtcttggaaaatctatgcgagccgtt
gaggaagaagtcaaggcgatgtctctgggtgatatcttagcatttgagaaaaatggagaa
gttactattgctacccaccgtctaatgcctactgatattaaggttgtaagagaattcaag
cggcctgctggtttgacgaagaaggagattgatgctaacggcgatggtgatgtgttggtg
attttggatttacgaccagatgagtcattgttcgaggctggtgtggctcgtgaggtggtt
aatagaattcagaaattgcggaaaaaagctgcccttgagcctactgatatggttgaggtg
tactttaattctctcgatgatgagaaatcaagcgtcgaacaagttttgaagtcacaggaa
ctatacgttagagatacagttgggtcttcattgcttccttacgccaaaatggcaccgcat
gcagtcatcctttatgaagagagttaccatggaatttataatttatcattcaccataact
ttggcaaggccggcgctggttttcaattcagaaactatcctagctctatatgcaggagag
aaaagatatgcacacaatctagaaatatacttgctatcaaaagatcactcttatttgaaa
tcagaattcaaacgggggaatggcaagataacagttgattgtattgagaatcaacctgcc
gtggaggtggaattgagaaaacatgttttcttgactgtcggcgactcataa
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