Tripterygium wilfordii (thunder duke vine): 120010268
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Entry
120010268 CDS
T07256
Name
(RefSeq) ABC transporter I family member 21-like isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120010268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120010268
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120010268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_5
ORC-CDC6-like
AAA_29
AAA_23
AAA_28
NACHT
AAA
AAA_22
AAA_18
SMC_N
AAA_15
Zeta_toxin
AAA_33
nSTAND_NTPase5
AAA_30
SRP54
AAA_16
AAA_25
PduV-EutP
DUF3584
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
120010268
NCBI-ProteinID:
XP_038716940
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Position
12:1019662..1023375
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AA seq
298 aa
AA seq
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MADKVSRSGEEEENGKSSSISVSGMQFGYDGQPPLFVEFNLNIFPGSRCLLVGANGSGKT
TLLRILAGKHMVGGRDVVRVLNHSAFHDTQLVCGGDLAYLGGSWSKTIGSAGEVPLQGDF
SAEHMIFGVEGINPIRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLYPFQVLLLDE
VTVDLDVVARMDLLDFFREECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRSEKLS
EVDELKSSTNLLSVVESWLRSETKQEKKKPITASSLNQKTSPFGSSPFTSSRHMAYYR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggtttcaagatcgggagaggaagaagagaatgggaaatcgagcagtatc
agcgtgtctggcatgcaattcggatacgacgggcagcctcctctttttgtggagtttaac
cttaacatctttcctggatctcgctgccttcttgttggcgctaatggatccgggaagaca
actttattgagaattctggcaggtaaacatatggttggaggaagagatgttgtgagggtg
ctaaatcattcagcttttcatgatactcaactggtttgtggtggtgacttggcctatttg
ggaggttcttggagtaaaaccattggatctgcaggagaggttccactccagggagatttc
tctgcagaacacatgatatttggagttgaaggtattaatcctatcaggagagagaagttg
atagagctgcttgatattgacctgcagtggcgaatgcataaggtatctgatgggcaaagg
cgccgagtccaaatatgcatgggtcttctttatccatttcaggttcttctgctagatgag
gttacagttgacttagatgttgttgctaggatggatttgctcgactttttcagggaagaa
tgtgaacagagaggagctaccattgtatatgcaacccacatttttgatggattggagaca
tgggctacccacctagcgtacattcaagatggtgaattgaggaggtctgagaagttatct
gaggtcgatgagttgaaaagctctaccaatctgctttctgttgttgagtcatggctccgt
tcggaaaccaagcaagagaaaaagaaacctattactgcatcttccctgaaccaaaagacc
tcaccctttggttcttcgcctttcacgtcatccagacatatggcatactaccgctga
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