Tripterygium wilfordii (thunder duke vine): 120013171
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Entry
120013171 CDS
T07256
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120013171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120013171
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120013171
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Paralog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA_23
AAA
AAA_30
ORC-CDC6-like
nSTAND3
AAA_7
Zeta_toxin
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
120013171
NCBI-ProteinID:
XP_038720826
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Position
13:315701..318272
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AA seq
335 aa
AA seq
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MDVHFPSPSMEGRKPMIAINGLKFTYPGIDGHPPPGSTPLIDDFSLTLNSGDRCLLVGSN
GAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTSLTASGDLCYLGGEWRRDVAFAGFDVA
IQMDISAEKMIFGVAGVDTQRRAELIKVLDVDLSWRLHKVSDGQRRRVQICMGLLKTFKV
LLLDEITVDLDVLARADLLNFLRKDCQERGATIIYATHIFDGLEDWPSHIVYVAHGKLQL
MMPMDKVKEISSLSLMRTVETWLRKERDEERMRRKERKACGLPEFEKRMEESRVAGDPAR
AAVRVVNNGWAAGRLHSTVAGEENFVLSSNRVLRQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgcatttcccttcgcctagcatggagggaagaaagccgatgatcgcgatcaac
ggcctgaaattcacctacccaggaatcgacggccatccaccgcctgggtctactcctttg
atcgacgatttctctctcactctcaactccggcgaccgatgtcttctcgtcggatccaat
ggcgctggtaaaactactattctgaagatcctgggaggaaagcatatggtggagcctcac
atggtgcgtgttctgggaagatccgctttccacgacacctctttgacggcttctggtgat
ctctgctatcttggaggagagtggaggagggatgtcgcttttgcaggttttgatgttgca
atacagatggatatttctgcagagaaaatgatatttggagttgcaggtgttgacactcaa
agaagagctgaacttatcaaagtgttagatgtggatctgtcttggagattgcacaaggta
tctgatggtcagagaagaagagtgcaaatttgtatgggcctccttaagacattcaaggtt
ctccttcttgatgagataacagtcgaccttgatgtgctggcaagggctgaccttttaaac
tttctcagaaaggactgtcaagagcgaggggctacaattatctatgctacccacatattc
gatggtctagaggattggccatcacatattgtgtatgtggctcatggcaagcttcaattg
atgatgccaatggataaagtgaaggagattagcagcctgtcactgatgagaacagtggag
acttggttgaggaaagaaagagatgaagagaggatgaggagaaaagagagaaaggcatgt
ggcctacccgagtttgaaaaacgaatggaggaaagccgtgttgctggtgatccagcacgt
gccgctgttcgtgtagttaacaacggttgggctgcaggaaggctgcactccactgttgct
ggtgaagaaaacttcgtcctcagctccaacagagttttgagacagtag
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