Thiothrix winogradskyi: L2Y54_06445
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Entry
L2Y54_06445 CDS
T08347
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
twn
Thiothrix winogradskyi
Pathway
twn01501
beta-Lactam resistance
twn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L2Y54_06445
01503 Cationic antimicrobial peptide (CAMP) resistance
L2Y54_06445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twn03036
]
L2Y54_06445
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twn02000
]
L2Y54_06445
01504 Antimicrobial resistance genes [BR:
twn01504
]
L2Y54_06445
Chromosome and associated proteins [BR:
twn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L2Y54_06445
Transporters [BR:
twn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L2Y54_06445
Antimicrobial resistance genes [BR:
twn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L2Y54_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_CzcB
BSH_RND
YknX_C
Biotin_lipoyl
Beta-barrel_RND_2
BSH_CusB
CzcB_C
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
UJS25676
UniProt:
A0ABY3T4J4
LinkDB
All DBs
Position
1269190..1270335
Genome browser
AA seq
381 aa
AA seq
DB search
MRIRTNTLRLLLVLGIVGGIPAVTQAAEVVRVETVTSLSSSVLGSTVIPYREVTLSAQVP
GAVKFVAGEAGSGFNQGDVIVRIDESQLTAKRNAVLAQIAIAQAALQNSQAQYTRELISP
RSKDIGAMPGFGLPAMFDMTMVRPFADSMMGNYDSDMGRYSDLMSSATGVSQAQSNLQQA
MSQLQEIDAALGDAKSVAPFEGIVLEKLVEVGDTVQPGQPLIKFGYVKYKRLQADVPSSL
VSNLREGMIVPAKIDGKASIMVKLTQIHPVADPSRHTVIVKFDLPVDAVAAPGMYAEVYL
PETNVGDAKIVVIPKTALLRGRSLPSVLVVKNDNTSELRLVRLGAEQEDGKVEVVSGLSA
DERVIDKPPATAASGWMPYAE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaggataagaacaaatacgctgaggttgctgctggtgcttggcattgtcggcgggatt
cctgctgtgacgcaggcagccgaagtggtgcgtgtggaaacggtgacgtctttgtccagc
tcggtgttgggaagtacggttattccctatcgggaggttacgttgtctgctcaagtgccg
ggggcagtgaaatttgtggcgggagaggcgggttctggcttcaatcagggcgatgtgatt
gttcgcatagatgagtcgcaattaaccgcgaagcgcaatgcagtgttggcgcaaattgcg
attgctcaggcagccttgcaaaattctcaggcacaatatacccgcgaattgatttcacct
cgcagtaaagacattggcgcaatgccgggttttggtttgcctgcgatgtttgacatgacg
atggtgcgaccgtttgctgattccatgatgggtaactatgactcggatatggggcgttat
tcggacttaatgagcagtgctaccggcgtttcgcaggctcaaagtaatttgcaacaggcg
atgtcacagttgcaggaaattgatgcggcgttgggtgatgccaagtccgtagcgccgttt
gaaggcattgtgctggaaaagttggtcgaagtcggtgatacggtgcagccggggcagcca
ttgattaagtttggatatgttaaatacaagcgcttgcaggcagatgtaccttccagtttg
gtgagtaatttgcgcgagggtatgattgtcccggctaagattgacggtaaagcctcgatt
atggtgaaactcacacaaattcatccggttgctgatcccagtcgtcatacggtgatagta
aaatttgatttgccagtcgatgccgtagcagcacccggcatgtatgctgaggtatacttg
ccggaaacaaacgttggtgatgcgaagattgtggtcattcccaaaacagccttgctgcgc
gggcgtagcctgccaagtgtgctggttgtgaaaaatgataatacctccgaattgcgcttg
gtgagactcggtgctgaacaagaagacggtaaagtagaggtggtttccggtttaagtgca
gatgaacgggtgattgataaaccacctgccactgccgcatcgggttggatgccttatgca
gaataa
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