Thiothrix winogradskyi: L2Y54_14620
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Entry
L2Y54_14620 CDS
T08347
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
twn
Thiothrix winogradskyi
Pathway
twn01501
beta-Lactam resistance
twn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L2Y54_14620
01503 Cationic antimicrobial peptide (CAMP) resistance
L2Y54_14620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twn03036
]
L2Y54_14620
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twn02000
]
L2Y54_14620
01504 Antimicrobial resistance genes [BR:
twn01504
]
L2Y54_14620
Chromosome and associated proteins [BR:
twn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L2Y54_14620
Transporters [BR:
twn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L2Y54_14620
Antimicrobial resistance genes [BR:
twn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L2Y54_14620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
DUF2564
Motif
Other DBs
NCBI-ProteinID:
UJS23174
LinkDB
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Position
2898787..2899956
Genome browser
AA seq
389 aa
AA seq
DB search
MTIRKKASVLLIAGLFASTFAVQAAEIIQVETTGARSQSVLGSTVIPYKEVTLSAQIPGV
VKYVAGAVGTNLTEGAVVFKVDEAQLIAKRNAVVAQISIAQAGVQNAQAQYYRELTSPRS
KDVGAMPGFGMPSMFDRMAVRPFAESFMGGYDSDTIRQGDLTNAMSAVSQAQGQLQQAMS
QLQEIDSALRDASAIAPFEGIILEKMVEVGDTVQPGQPLVKFGYIKYKRLQADVPSGLVG
NLSKDMLLPARIDGSTDTSVRVSEIYPIADPSRHTVTVKFDIPMEITTAPGMYAEIYVPE
NKKGANQTIVIPRTALMKGSSLPGVLVVKDNNTSELRMVRLGAEQNGGGKVAVISGLNPG
EKIIDNPPAGVTSGWMPTTVNPDPAPAAQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgactatacgcaaaaaagcgtcggtattgttaatcgctggtttgtttgccagcacattt
gccgtacaagccgctgaaatcatccaggtcgaaaccacaggcgctcgctcgcaatcggtc
ttgggtagcaccgttattccgtacaaagaagtgaccttaagcgcccagattcccggtgtg
gtgaaatacgtggcgggcgcggtgggcactaatcttaccgaaggcgcggttgtattcaag
gttgacgaagcccaactcattgcaaaacggaatgccgtggttgcgcagatttccattgcc
caagcgggcgtacaaaacgcgcaagcccaatattaccgtgaactgacttccccgcgcagc
aaggacgtgggcgctatgcccggttttgggatgccctccatgtttgaccgcatggcagtg
cgcccgtttgcggaatcattcatggggggttatgactctgacactatccgtcagggcgat
ttaaccaatgccatgtccgccgtttcacaagcacaaggtcagctccaacaagcgatgtca
cagttacaggaaattgactctgccttacgcgatgccagcgctattgccccgtttgaaggc
attatcctcgaaaagatggtagaagtcggcgataccgtacagcctggtcagccgctggtc
aaattcggctacatcaaatacaaacgtttgcaagccgacgtgccttccggtctggttggc
aacttgagtaaggatatgttgttaccggcacggattgatggcagtaccgacacctccgtg
cgggtttccgaaatttatccgatcgctgaccccagccgccacacggttacggtgaagttt
gatattccgatggaaatcaccactgcaccgggtatgtatgcagaaatttatgtgcctgaa
aacaaaaaaggcgcaaatcaaacgatcgtcattccacgcaccgccctgatgaaaggcagc
agtttaccgggtgttttagtggtgaaagacaacaacacctcggaactgcgcatggtacgc
ttgggcgctgaacaaaatggcggcggcaaagtagcggttatttcgggcttgaatccgggt
gaaaagattattgacaacccaccagcaggtgttacatcgggatggatgccgacgactgtt
aacccggatccggctccggctgcacaataa
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