Thiomicrorhabdus xiamenensis: HQN79_00320
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Entry
HQN79_00320 CDS
T07160
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa01501
beta-Lactam resistance
txa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HQN79_00320
01503 Cationic antimicrobial peptide (CAMP) resistance
HQN79_00320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
txa02000
]
HQN79_00320
01504 Antimicrobial resistance genes [BR:
txa01504
]
HQN79_00320
Transporters [BR:
txa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HQN79_00320
Antimicrobial resistance genes [BR:
txa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HQN79_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QKI88120
UniProt:
A0A7D4SHD9
LinkDB
All DBs
Position
complement(67395..70517)
Genome browser
AA seq
1040 aa
AA seq
DB search
MLSKFFIDRPVFASVFSLIIVIAGYMGMKSLPISEYPQIVPPQVQVQATYPGASAETLAE
TVAAPLEQAINGVDNMLYINSVSSSSGVLTLTVTFQIGTDIDQANINVNNKVQGALNKLP
AEVQQLGVKVNKRSPSILKVISLYSGDESLDTVFIANYGLINVVDELARIPGVGEVRQFG
SKDYSMRIWLNPNKLKKFDLTPADVQAAIRQQNSQFAAGKFGAEPNETGQAFTYTVTTAG
RLNNPEEFENIILRSEPNGALLRLKDVARVELGAQAYNFNATFDGKPTVPMGVFLQPGAN
ALETGERVDAVMAELAERFPQGLDYSIPYDTNEFVKISIDKVLYTLVEALILVVLVVFLF
LQNWRATLIPVLAIPVSIVGTFVGMYLLDFSINQLTLFGMILAIGIVVDDAIIVVENVER
IMRTEHKGPREATIQAMNEITGPIIAIVLVLGAVFIPVAFIEGLSGEMYKQFAITIVISV
TISGIVALTLTPALCANMLKEGHQQANFLFRGFNRGFEGLTKGFSAGVRTVMRYSLVSIL
LFGGLVYVTYDTLQSLPKSLVPQEDKGTLFVLSYLPPASSLAQMEDVRDQVSETLLAHPG
VKHSVSFAGFDLQTFTNRTDSGVSFVKLEHWDQRLEQGLPSNAIVGQLFGQLNAIPNAFS
IPIGMPTIMGMSMTGGFEAYLQNRNGTGSEALNKVAQELVAKASQRPELQQVRTTFNTRV
PQYEALVDREKAQLLNVSAYEIFAAMQATFGSLYVNDFTLFGRTFKVNLQAEADYRDTPD
KLSQVFVRSQDGNMIPLSALVTVERKTGADTVDRFNLFASAKMMGDPAPGYSSGQALAAF
EEVAAEVLPDGFQLGWVGEAYQQKASSDSGSQAFLFGLLFVFLILAAQYERWSIPLAVIT
AVPFAVLGASLMVMFSGLSNDIYFELGLLTLIGLSAKNAILIVEVAMQKRRAGMSLSEAA
ELAAKTRFRPIVMTSLAFTIAAIPLMLSEGAGAAARVSVGTGLVGGMIAATLLAPLFVPM
FFKLIAGLSENKSILRKKPS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaaattctttatcgatcggccggttttcgcatcagtattttcgctgataatc
gttatcgccggttacatggggatgaaatccctgccgatctcggagtatccgcaaattgtg
ccgcctcaggttcaggtgcaggcaacctatccgggcgccagtgccgaaactctggctgaa
accgtcgccgcgcctctggagcaggcgattaacggggttgataatatgctgtatatcaac
agtgtatcctcatcctccggggttctgactctgaccgtgaccttccagatcggtaccgat
atcgatcaggcgaacatcaacgtcaataacaaagtgcaaggcgctttgaacaaactgccg
gccgaagtccagcaactgggagttaaggtcaataaacgctccccgagtattttgaaagtc
atctccctgtattcgggtgacgaaagtcttgatacggtctttatcgctaactacggtctg
attaacgtagttgacgaattagcgcgtattccgggcgtcggcgaagttcgccagttcggt
tccaaagactactcaatgcgcatctggctcaacccgaacaaattgaagaagtttgacctg
acgccggccgatgtccaagcggctatccgtcagcagaactctcagtttgccgccgggaaa
ttcggtgccgaaccgaacgaaaccggacaggcctttacctatacggttaccacggcagga
cgcctgaataatccggaagagttcgaaaacattattctgcgttcagaaccgaacggcgcc
ctattgcgtctgaaagacgtagcccgtgtcgaactcggcgctcaggcgtacaacttcaac
gccacttttgacggcaaaccgaccgttccgatgggcgttttcctgcaacctggtgccaac
gctctggaaaccggcgagagagttgacgctgtaatggccgaattagccgagcgtttccca
caggggctggactactccattccgtatgacaccaacgaattcgttaagatttcgatcgat
aaggttctgtatacacttgttgaagcgctgattctggtggtactggtggtcttccttttc
ctacagaactggcgtgccaccttgattcctgtcctggcgattccggtatcgattgtcggt
actttcgtcggtatgtatctgctcgacttttcgatcaaccagctgacactgttcggcatg
attctggccatcgggatcgtggtcgacgatgccattatcgtggtcgaaaacgtcgaacgg
attatgcgcacggaacataaaggaccaagagaagcgaccattcaggcaatgaacgaaatt
accggaccgattatcgccatcgttctggttctcggtgcggtctttattccggtggccttt
atcgaaggtctgagcggcgaaatgtataaacagttcgccatcaccattgttatttcggta
accatttccggtattgtcgctctgacgctgactccggcactgtgcgcgaatatgctcaaa
gaaggacatcagcaggcaaacttcctgttccgcggctttaaccgtgggtttgaaggcttg
accaaaggtttcagtgccggtgttcgcaccgttatgcgctacagcttggtcagcatcctg
ctgttcggcgggctggtttatgtcacttacgacactttgcaaagcctgccgaaaagcctg
gtaccgcaagaggataagggaaccctgtttgttctgagctacctgcctccagcttcgtcg
ctggcacagatggaagacgtacgtgatcaggtcagcgaaaccttactggctcacccgggg
gtcaagcactcggtcagctttgccggttttgacctgcaaacctttactaaccgtaccgac
tccggtgtctctttcgtaaaactcgaacactgggatcaacgtctggaacaaggcttgccg
tccaacgcgattgtcggccagctgtttggtcaactgaatgccatcccgaatgccttcagt
atcccgatcggtatgccaaccattatggggatgagtatgaccggtggctttgaagcctac
ctgcaaaaccgtaacggaaccggttccgaagccttgaataaagtcgcgcaggaattggtg
gccaaggcgtctcaacgccctgaactgcagcaggttcgcaccacattcaatacccgtgta
ccacaatatgaagcactggtagatcgtgaaaaagcacagctgttgaatgtgtcggcttac
gagatttttgcggcaatgcaggcgacattcggaagtttgtacgtcaacgacttcactctg
ttcggacgcaccttcaaagtgaacctgcaggctgaagccgactatcgcgacacgccggat
aaactgtcacaggtctttgtccgttcgcaagacggcaatatgattccgttaagcgcattg
gtaacggtcgaacggaaaaccggtgccgataccgtggatcgcttcaacctgttcgcatca
gctaaaatgatgggcgatccggcaccaggttactcgtccggacaggctctggccgctttt
gaggaagtggctgcggaagtcttgccggatggtttccagcttggttgggtcggcgaagct
tatcaacagaaagcctcttcggattccggatcgcaagctttccttttcgggttgctgttt
gtattcctgattctggcagctcagtatgaacgctggtcaatcccgctggcggtaattact
gcagtgccctttgcggtactgggggcttcgctgatggtcatgttcagcggactgagcaac
gatatttacttcgaactcggtcttctgacgctgatcggtctgtcggcgaaaaacgcgatt
ctgatcgttgaggttgccatgcagaaacgccgtgcaggcatgtcactgagtgaagcggcc
gagctggcggcaaaaacccgtttccgtccgattgttatgacctcgctggcctttaccatt
gcagccatcccgctcatgctttcggaaggtgcaggtgcggcggctcgtgtatcggtcgga
acaggactggtcggcggcatgatcgcagcgaccctcttagctccgctgtttgttcctatg
ttctttaaattgattgccggtttaagcgaaaataaaagcattcttcgcaaaaagccaagt
taa
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