Thiomicrorhabdus xiamenensis: HQN79_05465
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Entry
HQN79_05465 CDS
T07160
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HQN79_05465 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txa03400
]
HQN79_05465 (nth)
Enzymes [BR:
txa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HQN79_05465 (nth)
DNA repair and recombination proteins [BR:
txa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HQN79_05465 (nth)
Prokaryotic type
HQN79_05465 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKI89058
UniProt:
A0A7D4NYA8
LinkDB
All DBs
Position
complement(1182715..1183347)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKQKRLEIFQRLSEAIPEPETELEYSSTFELLIAVILSAQATDKGVNIATRKLFPVANT
PQAIYALGVDGLKEYIKTIGLFNSKAENIIKACKMLVELHGSVVPDNRKDLEALPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVSNRTKLAPGKTVLEVEKKLLKNVPKEYLIPAHHLLI
LHGRYTCTARKPRCGACCIYDLCEYKEKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacagaaacgattagaaatattccaacgcctcagcgaagcgattccggaaccg
gaaaccgagctggagtattccagtacttttgaactgctgatcgcggtgattctttccgcc
caggcaaccgacaaaggcgtcaatatcgccacccgcaagctgtttccggtagccaatacg
ccgcaagcgatctatgccttgggcgtagacggtcttaaagagtacatcaaaaccatcggt
ctgtttaactccaaagcggaaaacattatcaaagcctgcaaaatgctggtcgaactgcac
ggctcggtggttccggacaatcgtaaagatcttgaagctctgccgggtgtcggccgcaag
acggcgaatgtcgttctcaataccgctttcggtcagccaaccatggcagtcgatacacat
atctttcgcgtctccaaccgcactaaactggcgccgggtaaaaccgtgcttgaagtggaa
aagaaactgctcaaaaatgtaccgaaagagtatctgatcccggcacatcacctgctgatt
ctgcacggccgttatacctgcaccgctcgtaaaccgcgctgcggcgcctgctgtatctac
gatttgtgcgaatacaaagaaaaaaccgagtaa
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