KEGG   Ursus arctos horribilis (North American brown bear): 113241577
Entry
113241577         CDS       T05909                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
uah  Ursus arctos horribilis (North American brown bear)
Pathway
uah03250  Viral life cycle - HIV-1
uah05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113241577
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    113241577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uah03019]
    113241577
Messenger RNA biogenesis [BR:uah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113241577
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam AID
Other DBs
NCBI-GeneID: 113241577
NCBI-ProteinID: XP_026335052
LinkDB
Position
Unknown
AA seq 697 aa
MDAGREAWDRHLLDEDTFNENFRNDDWPSRTYLCYKVEGPIQGSGVPLGQDKGILRNKPA
QGPEPSCHAECYLLEQIQSWNLDPKLHYGVTCFLSWSPCAKCAQKMARFLQENSHVSLKL
FASRLYTRQQYDENYKEGLRTLKRAGASIAIMTYREFELCWKTFVLHDQEGSCFQPWPFL
HEESQKFSEKLQAILQQSQSRKEVGRLWRHPGSLRSRGFPKAKLGRRMEPWHHHPRNPME
WISPKTFFFQFPSLCYAWGRKFCYLCFQVERGGHPLSDWGVFRNKVHRRAPYHAELCFLS
WFRAQNLSPDENYHVTWFSSWSPCHTCADEVVKFLDQYRNVTLDIFAARLYCFWDPPFQN
GLRELQSAGVQLDIMSFEDYQYCWENFVDHKGMRFQSRNLLRHRDVLATELENILRVRDE
DLTHRPHLPDAQSPDTILNDSKGQHREWSPGAPDKGQAWDKPAEAGSCLGTPKVRLARFC
KECCNFCNRPEQEFIRLPFWLTTMNPLPRKVFYHQFGNQKRVPRPYRRRKTYLCYQLRPQ
DGPVTARGCLQNKKKRHAEIRFIDKIRSLQRDSSQTFEITCYVTWSPCFTCAEELVAFVR
DHPHVRLRLFASRLYFHWLRKYQEGLRLLHKSRIPVVIMNLPEFQNCWGEFVDNQDKPFQ
PWNKLETYSENINRRLQRILEQPQNDLENDFRNLQLR
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggatgctggcagagaggcctgggacagacacctcctggatgaggacaccttcaatgag
aacttccgcaatgatgattggccctccagaacctacctctgttacaaggtcgagggtccc
attcagggctccggggtccctctgggccaggataagggcatcctgcgcaataagcctgcc
cagggacctgagccctcctgccacgcggagtgctacttgctggagcagatccagtcctgg
aacctggacccgaagcttcactatggggtcacctgctttctctcctggagcccctgcgct
aagtgtgcccagaagatggctcggttcctgcaggagaacagccacgtgagcctgaagctc
ttcgcctcccgcctctatacccgacagcagtatgatgagaattacaaggaggggctgcgg
accctgaagagggctggggccagcatcgccatcatgacctacagggagtttgagctctgc
tggaaaaccttcgtgctccacgaccaggagggaagctgcttccaaccctggccatttctg
catgaggagagtcagaaattctctgagaaactgcaagccattctccagcaaagccaaagc
aggaaggaggtggggcgtctgtggaggcacccgggaagtctcagatcccgaggctttcct
aaagcaaagctggggagaagaatggagccctggcatcaccacccaagaaacccaatggag
tggataagtcctaaaaccttcttcttccaattcccaagcctgtgctacgcttgggggcgg
aagttctgctacctgtgcttccaagtggaaagaggggggcaccccctgagtgactggggg
gtctttcgaaacaaggtccatcgccgggctccctaccatgcagaactctgcttcctctct
tggttccgtgcccagaatctgtcccctgatgagaattaccatgtcacctggttctcatcc
tggagcccctgccacacctgtgcagatgaggtggtcaagttcctggaccaatacaggaac
gtgaccctggacatcttcgctgcccgcctctactgcttctgggatccacccttccagaat
gggcttcgcgagcttcagtctgcaggggtccagctggacatcatgtcctttgaagattat
caatactgttgggaaaactttgtggaccacaaggggatgcgcttccagagtcggaatcta
ttaagacatagggatgtgctggccacagagcttgagaatattcttagggttagggatgaa
gatctgacccatagacctcaccttccagatgcccagagtcctgacacgatactgaatgac
tctaaagggcaacacagggaatggagccctggtgccccagacaaagggcaggcctgggac
aagccagctgaggcaggcagctgcctagggactcccaaggtcagacttgcacggttttgc
aaagaatgctgtaatttctgtaaccgacctgagcaagagttcatccgccttccattttgg
ctaaccacgatgaacccactaccacgaaaagtattctaccatcagttcggcaaccagaag
cgggtcccaaggccctaccgccggagaaagacctacttgtgctaccagctgaggccccag
gatggccccgtaactgccagaggctgccttcagaacaagaaaaagcgccatgcagaaatt
cgctttattgacaagatcaggtcactacaacgggactcatcccagacattcgaaatcaca
tgctatgtcacatggagcccctgcttcacctgtgcggaggaactggtggcgtttgtcaga
gaccacccccacgtcagactgcggctctttgcctcccgcctgtatttccactggctgagg
aagtatcaggaggggctgagactattgcacaagtccaggatcccagtggtcatcatgaac
ctcccggagtttcagaactgctggggggagtttgtggacaaccaggacaaaccttttcag
ccctggaacaagctggaaacgtacagtgaaaacataaaccgtcggctccagaggatcctc
gagcagccccagaatgatttagaaaatgacttcagaaatttgcaacttcgatga

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