Ursus arctos (brown bear): 113246155
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Entry
113246155 CDS
T05909
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah00310
Lysine degradation
uah01100
Metabolic pathways
uah04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113246155 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
113246155 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uah03036
]
113246155 (SETDB1)
Enzymes [BR:
uah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
113246155 (SETDB1)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113246155 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
113246155 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
Tudor_5
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
113246155
NCBI-ProteinID:
XP_026342440
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPVEPPQPAAPPAPPAPPVPPAPPAPPLSPQAGD
NDSLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKLGSNQTYRSPLGS
TASAPAAPPAPPAPVAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRS
AQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCD
FLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKER
IPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLE
ECLPTGVYECNKRCKCDPHMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCI
YAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDG
NSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPD
LGPPHIPVPPVIPVGGCNPPSSEETPKNKVASWLSCNSVSDGGFADSDSRSSFKTSEGGE
GRAGGGRGEAEKASTSGPGFKDEGDIKQAKKEDPDDRNKMAIVTESSRNYGYNPSPVKLE
GLRRPPSKTSMHQSRRLLASAQPNTDDVLTLSSSTESEGESGTSRKPATGQTSATAVDSD
DIQTISSGSEADDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESA
PVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFA
SKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagctgtggttgaggagctgggtatctcgatggaggaactt
cggcagttcatcgatgaagaactagaaaagatggactgtgtacaacagcgtaagaagcaa
ctagcagagttggaaacgtgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggtctgcaataccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaggatggtgacctgatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggttggaccaggaaagaagtacaaggtgaaattcgacaacaaaggaaagagt
ctcctgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaggatgggaatcaggtctggctctatgctggcatt
gtagccgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tacgcttcctacgttacacagtctgaactctatcccatttgtcggccactgaagaagact
tgggaggacatagaggacgtctcctgccgggacttcatagaagagtatatcacggcttac
cccaaccgccccatggtgctgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtctcgggtcgaggaggtggacggcagcctagtcaggattctcttcctg
gatgacaagagatgtgaatggatctatcgaggctctacacggctagagcccatgttcagc
atgaagacttcctcagcctctgcattggagaagaagcaagggggacagctccggacacgt
ccaaatatgggtgctgtgaggagcaaaggccccgtggtccaatacacccaggatctgacc
ggtaccgggacccagttcaagccagtggagcccccacagcctgcagcccctcctgccccc
cctgcgccccctgtcccacctgccccacctgctccccctctgtccccacaggcaggtgac
aatgacagcttggaaagtcagcttgcccaatctcggaagcaggtagccaaaaagagcaca
tccttccggccaggatctgtgggctctggtcattcctcccctacatctcctgcactcagt
gaaaatgtccctgctgggaaacttggcagcaaccagacgtacaggtcacctttaggttca
acagcctctgccccagcagcacccccagcacccccagcacccgtggcaccgcccgccttc
cacggcatgctggagcgggccccagcagagccctcctaccgcgcccccatggagaagctc
ttctacttacctcatgtgtgcagctatacgtgtctgtcccgagtcagacctatgagaagt
gcgcagtaccggggcaagaatcctctgctcgtcccacttctctacgacttccggcggatg
acggcccgccgccgagttaaccgcaagatgggctttcatgttatctataagacaccctgt
ggcctctgccttcggacaatgcaggagatcgaacgctatctttttgagactggctgtgac
ttcctcttcctggagatgttctgtttggatccatatgttcttgtggaccgaaagtttcag
ccctataaacctttttactatattttggacatcacttatgggaaggaagatgttcccctc
tcctgtgtcaatgagattgacacaacccccccaccccaggtggcctacagtaaggaacga
atcccgggcaagggtgttttcattaacacaggcccagaatttctggtcggttgtgactgc
aaagacgggtgccgtgacaagtccaaatgtgcctgtcatcagctaactatccaggccaca
gcctgcaccccgggcggccagatcaaccctaactctggctaccagtacaagagactagaa
gagtgtctgcccacaggagtttatgagtgtaacaaacgctgcaaatgtgacccacacatg
tgcacaaaccggttggtgcagcatggactccaggttcggctacagctattcaagacgcag
aacaagggctggggtatccgctgcttggatgacattgccaaaggctcctttgtctgtatt
tatgcaggcaagatcctgacagatgactttgcagacaaggagggcctggagatgggtgat
gagtactttgccaatctggaccatatcgagagcgtggagaacttcaaggaaggatatgag
agtgacgccccctgttcctctgacagcagcggggtggacttgaaagaccaggaagatggc
aacagtggtacagaggatcccgaggagtccaatgatgacagctctgatgacaacttctgt
aaagatgaggacttcagcaccagctccgtgtggcgcagctatgctacccggcggcagacc
cggggccaaaaggagaacggactgtctgagacagcttccaaggactcccgccccccagac
cttggccccccacatattcctgtccctccagtgatccctgtgggtggctgcaatccaccc
tcctctgaagagacacccaagaacaaggtggcctcatggttgagctgcaatagtgtcagt
gatggtggctttgccgactctgatagccgttcatccttcaagactagcgaaggtggggaa
ggccgggctgggggaggccgaggggaggctgagaaggcctccacttcagggccgggcttc
aaggatgagggagacatcaagcaggcaaagaaagaggaccccgatgaccgaaacaagatg
gcaatagttactgaaagctctcgaaattacggttacaatccttctcccgtgaagcttgaa
ggacttcgccgcccacctagtaagactagcatgcatcagagccgacgactcttggcctct
gctcagcccaacactgacgatgtcctaacattgtccagcagcacagaaagcgagggggag
agtgggaccagccggaagcccgccactggtcagacttcagccacagcagtggatagcgat
gatatccagaccatctcctctggctccgaagcagatgactttgaggacaagaagaacatg
tctggtccgacaaagcgccaggtggcggtaaaatcaacccgaggctttgctcttaagtca
acccatgggattgccattaaatcaaccaacatggcatccgtggaaaagggggagagtgca
cctgttcgtaagaacacacgccagttctacgatggggaagagtcttgctacatcattgat
gccaagctcgaaggcaacctgggccgctacctcaaccatagctgcagccccaacctgttt
gtccagaatgtcttcgtggacactcacgatcttcgcttcccctgggtggccttctttgcc
agcaagaggatccgggctggcacagagctcacttgggactacaactacgaggtgggcagc
gtggaaggcaaggagctgctctgctgctgcggggccatcgagtgcagggggcgtcttctc
tag
DBGET
integrated database retrieval system
