Ursus arctos (brown bear): 113251530
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Entry
113251530 CDS
T05909
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113251530 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uah03400
]
113251530 (LIG4)
Enzymes [BR:
uah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113251530 (LIG4)
DNA repair and recombination proteins [BR:
uah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113251530 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
113251530
NCBI-ProteinID:
XP_026349371
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASHTSPTVASHVPFADLCSTLERIQRSRGRAEKIRHFREFLDSWRRFHDALHKNQRDV
SDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRA
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHRQGDVYQYFSRNGYNYTD
QFGNSPQEGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEESDL
QTCYCVFDVLMVNNKKLGRETLKKRHEILTSVFTPIPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAIAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSGILC
GTEKPEVYIEPCHSVIVQVKATEIVSSDMYKAGCTLRFPRIERIREDKEWHECTTVDDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGMDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDRYGDSYFVDTDLNQLKEVFSG
IKNSGEQTPGEMASVIAHLEFRYSWDRCPLSMFRQHVIYVDVYAVINDLSTKIEGTRLAV
MGLELRFHGAKVVSHLARGVSHVVVGEDRSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENRYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacatacttcgccgactgtcgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgcatacagagaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagacgatttcatgatgcccttcataagaaccaaagagatgtc
agcgactccttttatccagcaatgagacttattctccctcagctagaaagagagagaatg
gcctacggaatcaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agaggaggaaaagacgcacttaaacttttgaattacagaacacccactggaactcgtgca
gatgccggagactttgcaacaattgcgtattttgtgttgaaaccaagatgtttgcagaag
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctgataaagaagagtcttcttcagctaataagtcagagttcagcc
ctggaacaaaagtggcttatacggatgattgtgaaggacttaaaacttggtttcagcgag
cagtctgtattttctgttttccataatgatgctgctgagttgcataatgtcaccaccgat
ctggaaaaagtctgtaggcaactgcatgatccttccataggcctcagtgatatttctatc
actttattctctgcctttaaaccaatgctggctgcaatagcagatattgagcgaatcgag
aaggacatgaaacaccagagtttctacattgaaaccaagctagacggcgagcgtatgcaa
atgcacagacagggggatgtgtatcagtacttctcccggaatggatataactatacggat
cagttcggcaactctccccaggaaggttctcttacaccgttcattcacagtgcattcaaa
acagacgtacaaatctgtatcctggatggcgagatgatggccttcaaccctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggaatctgatttg
cagacttgttattgtgtgtttgatgtactgatggttaataataaaaagctaggacgtgag
accctgaaaaagaggcatgaaattcttactagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacaccctctgtctatttacaagcca
gacaaaagaggtgaaggatggctgaagattaaaccagagtacgtggatgggctgatggac
gagctggacatcttaattgtcgggggctactggggcaaaggttcccgaggtgggatgatg
tctcattttttatgtgctatagcagaaaagccgcctcctggtgaaaaaccatccgtgttt
cacactctgtgccgtgttggttccggttataccatgaaggaactgtacgatctgggtttg
aaattggccaaacattggaagccttttcataaaaaagctccacccagcggcattttatgt
ggcacagagaagccagaagtatacatcgagccttgccattctgtcattgttcaagtgaag
gcgacagagatcgtctccagtgatatgtataaagctggctgcacgttgcgttttccaagg
atcgaaaggataagagaagacaaagagtggcacgaatgcaccaccgtggatgacttagag
caacttcgcgggaaagcgtcgggaaagcttgcgtccaaacacctgtacgtaggtgatgat
gatgagccgcaagaaaagaagcggaaagctgccccgaaggtgaagaaagttattggaatt
atcgagcacttaaaagcacccaacctttctaacgtaaacaaagtttctaatatattcgaa
gatgtggagttctgtgtcatgagcggaatggacagccatccaaagcctgatctggagaac
aggatcgcagaatttggaggttatatcgtccaaaatccaggcccagacacatactgcgtg
atcgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgctagagtgttttaagaccaaaagctgtgtgccgtggcagccc
cgctttatgattcatatgtgcccatcgacaaaggaacattttgcccgtgaatacgatcgt
tatggcgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcaggc
attaaaaattccggcgaacaaactcctggagaaatggcttctgtgattgcccatttagag
tttcggtattcctgggaccgctgccctctcagtatgttccgacagcacgttatttatgtg
gacgtgtatgctgtcattaatgacttgagtaccaaaatcgaagggacgagattagctgtc
atgggtttggaacttcgatttcatggagccaaggtagtttcccatttagctcggggagtg
tctcacgtagtcgtcggggaggaccggagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtcactgattccatagacaag
tgtgagttgcaggaggaaaatcgatatttggtttaa
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integrated database retrieval system
