Candidatus Uabimicrobium amorphum: UABAM_06628 Help Entry UABAM_06628       CDS       T07685                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism uam  Candidatus Uabimicrobium amorphum Pathway uam03030   DNA replication uam03410   Base excision repair uam03420   Nucleotide excision repair uam03430   Mismatch repair Brite KEGG Orthology (KO) [BR:uam00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     UABAM_06628    03410 Base excision repair     UABAM_06628    03420 Nucleotide excision repair     UABAM_06628    03430 Mismatch repair     UABAM_06628  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:uam03032]     UABAM_06628    03400 DNA repair and recombination proteins [BR:uam03400]     UABAM_06628 Enzymes [BR:uam01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      UABAM_06628 DNA replication proteins [BR:uam03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      UABAM_06628 DNA repair and recombination proteins [BR:uam03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      UABAM_06628    NER (nucleotide excision repair)     GGR (global genome repair) factors      UABAM_06628    MMR (mismatch excision repair)     DNA ligase      UABAM_06628   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       UABAM_06628 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT HHH HHH_3 DNA_ligase_ZBD BRCT_2 Motif Other DBs NCBI-ProteinID:  BBM88207 UniProt:  A0A5S9F6S5 LinkDB All DBs Position complement(9332884..9334959) Genome browser AA seq 691 aa AA seqDB search MSTKVKKEIDELRQEIWEHAKRYYVDNQPTISDYEYDLLFRKLQDLEKKHPQFVTPDSPS QRVAPVESTPFKRTSHRLPMLSIENSYSLEEISDFAKRISRNTSIATSKTAFVVEPKIDG VAISLWYEDGVLAKALTRGDGVVGEDVTNNARTIRSLPLKLLGTAPKFLEVRGEIYLSHK AFEKINRERAAAGENVFANPRNAAAGTLKMLDNKVVQHRQLDFFAHSLGEYTDLSYTHHY DTLQSFRKLGLPVNEHCKRAKNLQQVLDLCEKWVEKKQKLAYDIDGLVIKVDRIDLQKQL ASTSRAPRWAIAYKFEHEQAITKLQDVIVQVGRGGTLTPVAILDPVQLAGTVVKRASLHN YEDIARKDVRIGDLVTIVKAGEIIPQVLGCDPTKRQGNEKIISPPTACPSCNGDVKKDSG GVYLRCVDKNCSEGFKAQLKFFASRQGMDISGLGEKIIAQLVDKKMVTSPADLYSLRKED LLLLERMGEKSAQKLIDNIEKSKNVPLPKLIFSLGVRHVGTKASKILAKKYQNIDALASA SVESLEEINEIGPVMAESICEYFDSEQGQNNIKTLRSVGVKMEELQVATTQQVTESPFSE KNIVLTGSLAKYTRGELQKKLEEMGAVVRSSVSKNTDYVIAGENAGSKLKKANDLGVTVL SEDELETMLHETVTAKHDNLQTNTTTQQTFF NT seq 2076 nt NT seq  +upstreamnt  +downstreamnt atgagcacgaaagttaaaaaagaaatcgacgagttgcgccaagaaatatgggaacatgcc aagcgctactacgttgacaaccaaccaacaattagcgactacgaatacgacttactcttt cgcaagttacaagatttagaaaaaaagcatccacaattcgttaccccagattccccttcg caaagagtagctcccgtagaaagcactcctttcaaaagaacttctcataggctaccgatg ttgtctatcgaaaatagctactcactagaagagataagcgatttcgccaaaagaatttca cgcaatacatctattgctacatcaaaaactgcttttgtcgttgagccaaaaatagacggt gttgccattagtttatggtatgaagatggtgtacttgctaaagcgttaacgagaggcgac ggcgttgtaggagaagacgtgacaaacaatgcacgtaccattcgcagtttacctttaaaa ttgctgggtacagctcctaaatttttagaagtgcgcggagaaatatatcttagtcacaaa gcttttgaaaaaatcaacagagaacgtgcggccgccggagaaaatgtatttgccaatccg cggaatgccgcggcaggcactttaaaaatgcttgacaacaaagttgtacagcatcggcaa ctcgatttttttgcccacagtttgggtgaatacaccgatttaagttacactcatcactac gatacgttacagtctttcaggaaactgggactaccagtaaatgagcactgtaaacgggca aaaaatctacaacaagtgcttgatctatgcgaaaaatgggtggaaaaaaaacaaaaattg gcatacgacattgatggtcttgtcatcaaagtcgatcggattgatttacaaaaacaactt gctagtacctctcgtgctccacggtgggccattgcatataagtttgaacatgaacaagca atcaccaagttacaagatgttatcgttcaagttggacgcggaggaacactaactcccgta gcaattttagaccctgtacagctagccgggaccgtagtaaaaagagcatctctacataac tatgaagatatcgcgcgcaaagatgtacgcattggtgaccttgtcacaatcgtcaaggca ggtgagatcatccctcaagtgcttggttgcgatccgacaaaacgccaaggaaatgaaaaa ataatttctcctcccacagcttgtccaagttgtaatggagatgtaaaaaaagatagtggt ggggtataccttcgctgcgttgacaaaaactgtagtgagggtttcaaggcgcagttaaag ttttttgcttcgcgtcagggaatggatattagtggactcggggaaaaaataatcgcgcaa cttgtcgacaaaaaaatggtaacaagtcctgccgacttatattctctgcgcaaggaggat ttactacttctagaacgtatgggagaaaaatctgcccaaaagctaatagacaacattgaa aaaagcaaaaatgtacctcttcccaaattgatattctcactaggtgtgcgtcacgtagga accaaagcaagtaagatactcgccaaaaaataccagaatattgatgctctggcttctgct tccgtcgagagtctcgaagaaatcaacgagattggtccggttatggccgaaagtatttgc gaatactttgacagcgaacaaggtcaaaacaatataaaaacgctgcgcagtgtcggtgta aaaatggaagaactgcaagtcgcaacaacccaacaagtgacagaatcaccgtttagcgaa aaaaatattgttcttacgggttctcttgcgaaatacacccgcggtgaattacaaaaaaaa ctagaagaaatgggtgccgtagtgcgttcctccgtttcgaaaaataccgattacgtcata gcaggtgaaaatgctggttctaaattgaaaaaagccaatgatttgggcgtcaccgttctc tcagaagacgaattggaaaccatgttacatgagacagtaaccgcaaagcacgacaatcta caaacgaacactactactcaacaaacatttttttag

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