Ursus americanus (American black bear): 123778525
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Entry
123778525 CDS
T07931
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123778525 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123778525 (KDM2A)
04121 Ubiquitin system [BR:
uar04121
]
123778525 (KDM2A)
03036 Chromosome and associated proteins [BR:
uar03036
]
123778525 (KDM2A)
Enzymes [BR:
uar01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
123778525 (KDM2A)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123778525 (KDM2A)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123778525 (KDM2A)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123778525 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
123778525 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
DUF7885
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
123778525
NCBI-ProteinID:
XP_045631889
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSNRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSADSSSDSSRGSHNGQVWDPQCSPRKDRKVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPARPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDNSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgaggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaacaaatacaatgcaaattttgttacttttatggagggaaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgattttcaagaat
tctgatggacttggaataaaaatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaagagcgagaaaaactc
tataatgtcatcagtctagagttcagccacaccaggctggagaacatggtgcagagaccc
tccacggtggatttcattgactgggtggacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccatcttggagatgcagtaccccaaagtacagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtctttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgttatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataacaaaccgctcccacctaactaaggaatttcagaaagagtccctcagt
atggacttggaattaaatgggttggaatctggaaatggggatgaagaagcagtggatcga
gaaccaaggcgcctgagcaataggcgttctgtcctcactagccctgtagccaatggggtt
aacctggattatgacggactgggcaaaacctgccgaagtcttccaagtctgaagaaaacc
ttgtcagcggactcatcctctgactctagccggggctcccacaatggccaagtgtgggat
ccccagtgcagtccccgaaaggacaggaaggtgcatctgacccattttgagcttgaaggc
ctccgctgtcttgtagataagttggagtctctgccactgcacaagaaatgtgtccccaca
gggatagaagatgaagatgctcttattgctgatgtgaagattttgctggaggagcttgcc
aacagtgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccccgcccggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaaaccggctcctcggttgacacctgtgaggccagctgccgcctcccccata
gtgtcaggagccaggcggagacgagtgcgctgtcggaaatgcaaagcctgtgtgcaagga
gagtgtggtgtctgccactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgtccttcggcagtgcttggcacccagactgcctcactcagtcacgtgt
tccctctgtggagaggtggatcaaaatgaggagacacaggacttcgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ctgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacaac
tcagagaaagcccagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcacccact
tccatgctgcagctcatccatgacccggtctccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagccttgacctcagt
tggaccaacatctccaagaaacaactgacgtggctcgtcaacaggctgccaggactgaaa
gacctcctcctagcaggctgttcctggtctgcagtgtctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataaaccaggtcaggacaatcgcagcaagctccggaat
atgactgacttccggctggcaggccttgacatcacggacgccacgcttcgcctcattatt
cgccacatgcccctcctttctcgactcgacctcagtcactgcagtcacctgacagatcag
tcctccaatctgctcaccgctgtcgggtcttccactcgctactccctcacagagctcaac
atggcaggttgcaataaactgacagaccagaccctgatctacctacggcgcatcgccaat
gtcaccttgatcgacctgcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
DBGET
integrated database retrieval system
