Ursus americanus (American black bear): 123780559
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Entry
123780559 CDS
T07931
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123780559 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uar03400
]
123780559 (TDG)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
123780559 (TDG)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123780559 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
123780559
NCBI-ProteinID:
XP_045635482
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MEAENAGSCSLPQAQAFYTFPFQQMMADAPAVVVPSEQAVPAEGADPAPAQEPVQETPKG
RKRKPRATEPKKPVEPKKPAEAKKSGKSTKAKEKQEKITDTFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYAENPCSGDPCSFSS
RGLTDSGESAFGDIPNGQWMTQSFTDQIPSFNNHCGTQEQEEGHHA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgagaacgcgggcagctgttcccttccgcaagctcaagctttttatacattc
ccgtttcaacaaatgatggcggacgctcccgcggtggtggtgccgagcgagcaggcagtg
ccggcagaaggtgcagacccagctcctgcccaggagcctgtacaagagactccaaaagga
aggaaaagaaaaccaagagcaacagaaccaaaaaaaccagtagaacccaaaaagcctgct
gaggccaaaaaatctggcaagtccacaaaagcaaaagaaaagcaagaaaaaattacagac
acatttaaagtgaaaagaaaggtagaccgttttaatggtgtttcagaagctgaacttcta
accaagacccttccggacattttgaccttcaatctggacattgtgattattggtataaac
ccaggactaatggcagcttacaaagggcatcattaccctggacctggaaaccacttttgg
aagtgtctgtttatgtcaggcttgagcgaggtccagctgaaccatatggatgatcacact
ttaccagggaagtatggtattggatttaccaatatggtggaaaggacaactccaggcagc
aaagatctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagttaaggttaaaaacttagagtttggacttcaaccccataagatccca
gacacagaaactctctgctacgttatgccatcatccagtgcgagatgtgctcagtttcct
cgagcccaggacaaggttcattactacattaagctgaaagacttgagagatcagctgaaa
ggcattgaacgcaacacagacgttcaagaggtgcaatatacgtttgatctgcagctagcc
caagaggatgcaaagaagatggctgttaaggaagaaaagtacgacccaggttatgaagca
gcgtacggcggtgcttatgcagagaacccgtgcagcggcgacccgtgcagcttctcttcc
agggggctaactgacagtggagaatcagctttcggtgacattccaaacgggcagtggatg
acccagtcgtttacagaccagattccttcctttaataatcattgtgggacgcaagaacag
gaagaaggacaccacgcttaa
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