Ursus americanus (American black bear): 123802972
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Entry
123802972 CDS
T07931
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123802972 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123802972 (EFTUD2)
Spliceosome [BR:
uar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123802972 (EFTUD2)
Complex C
U5 SnRNP specific factors
123802972 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
123802972
NCBI-ProteinID:
XP_045669994
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttatatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgacgacgac
gacgacgacgatgtgggagaccatgatgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagcggaggaggtgtacggccccgaggtggagaccatc
gttcaggaggaagacacccagcctctcactgaacctattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcagagctcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacgtgttttgtagattgcttaatagagcagactcacccggaaatcaggaagcgc
tacgaccaggatctgtgctatactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactcctgtgacggtggtcttgccagataccaagggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagttgtccttttcattgatgccgctgaaggcgtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccgccgaccgatgcttactacaagctgcggcac
attgtagatgaggtcaacgggctgataagcatgtattccaccgacgagaacctcatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctatgctgacaccttcggtgacataaactaccaggaatttgct
aaaaggctctggggtgacatttatttcaaccccaaaacacgaaagttcaccaaaaaggcc
cccaccagcagctcccagaggagctttgtggagtttatcttggagcccctttataagatc
ctcgctcaggttgtgggtgacgtggacaccagcctccccaggactctggacgagctgggc
attcacctgaccaaggaagagctgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcacatcccctcc
ccaaaggtgggcgccaagcccaagattgagcacacctacaccggcggtgtggattctgat
ctcggcgaggccatgagcgactgtgaccccgacggtcccctgatgtgccacactaccaag
atgtacagcacagatgatggcgttcagtttcatgcctttggccgggtgctaagtggcacc
atccacgcggggcagcctgtgaaggtgctgggggagaactatacgctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctctggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaacctcgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgtgatcaagattgctgtggaaccagtcaacccctcagagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggggagcatgtgattctgggtactggggagctctacctggactgtgtg
atgcacgatttacggaagatgtactcagagatcgacatcaaggtggctgatcctgttgtc
acgttttgtgagacggtggtggaaacatcttccctcaagtgctttgctgaaacgcccaat
aagaagaacaagatcaccatgattgctgagccacttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaaactgggagaattcttccagacc
aagtacgattgggatctgctggctgcacgttccatctgggcttttggccctgacgccaca
ggccccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttcttggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaacccgggaggggcccctctgt
gatgagctgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagccc
ctgcaccggggcgggggccaaatcatccccacggcaaggagagtcgtctattctgccttc
ctcatggccactcctcgtctgatggagccttactacttcgtggaggtgcaagcccctgcg
gattgcgtgtctgctgtgtacaccgtgctggccaggcgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccccgccattgattct
tttggctttgagactgatctgcggactcatacccaagggcaggccttttccttgtctgtc
ttccaccattggcagattgtacctggtgatcctcttgacaagagcattgtcatccgccca
ctggagccacagcctgctcctcacctggcccgggaattcatgatcaaaactcgtcgcagg
aagggcctgagtgaggatgtaagcatcagcaagttcttcgatgatcccatgttgctggag
cttgccaagcaggatgttgtgctcaattaccccatgtga
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integrated database retrieval system
