Candidatus Uabimicrobium helgolandensis: UABHE_000114
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Entry
UABHE_000114 CDS
T10824
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl01501
beta-Lactam resistance
uhl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
UABHE_000114
01503 Cationic antimicrobial peptide (CAMP) resistance
UABHE_000114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uhl03036
]
UABHE_000114
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
uhl02000
]
UABHE_000114
01504 Antimicrobial resistance genes [BR:
uhl01504
]
UABHE_000114
Chromosome and associated proteins [BR:
uhl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
UABHE_000114
Transporters [BR:
uhl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
UABHE_000114
Antimicrobial resistance genes [BR:
uhl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
UABHE_000114
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_YBHG
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
HH_MFP_RND
BSH_LcnD
Biotin_lipoyl
YknX_C
BSH_YknX
BSH_YhbJ
PTS_EIIA_1
BSH_ALG44
Rootletin
Motif
Other DBs
NCBI-ProteinID:
XEY22408
LinkDB
All DBs
Position
complement(166626..167903)
Genome browser
AA seq
425 aa
AA seq
DB search
MQRFFYILIVIMFTMLGCDSSESTDTQNSSAKKSPRKQYSPPPVQVEIGKIREKNLEVKV
DIVGTTVALRKAVLSNATAGKVVKIHLEEGMKVKKGQALLQVDTYSWQAKIAEKKAECLR
WEAEIEKLKNGYIVEDVNRSEAVLREKEATLKKFEVEKNRKQDLLNQNGIARSEWDETRF
SYDAMAAQVSQARAELKKMKNGSRFEDVKIASAHLKTVQAQLRQAQDNFKNTTITAPFDG
VISKKYVEIGEWLSAGATIADLVDLSKVRVQVSIAEKYISLVRLKMKAKVKLDAFPGFET
WGTVSAIIPRTEGLARNFPVDLVIDNPQGNIYEGMFCRVEGILREDKGVLMVHRDSFIHQ
QGKITVAQVTKEHLVNMVEVVLGVREGEWFEIVSSSSPLKNDDMVVITNNNNIYPGAKVI
ITKGL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgttttttttatattttgattgttattatgtttactatgttagggtgcgatagt
tcagaaagtactgatactcaaaattcttcagcgaaaaaatcgcctcgaaagcagtactct
ccgccaccagttcaggttgaaataggtaaaattagagaaaagaatcttgaagttaaagtc
gatattgttggtacaacagtcgccttacgcaaagctgttctttctaatgctactgcaggt
aaggtagtaaagatccatttagaagaagggatgaaagttaaaaaagggcaggcactcctt
caagtagatacatattcatggcaagcgaaaattgctgaaaaaaaagcagagtgtttgcga
tgggaagcagaaatcgaaaagctaaaaaatggctatattgtcgaagatgtcaatcgttca
gaagctgtactccgtgaaaaagaagcaacattgaaaaaatttgaggttgagaaaaatcgc
aaacaagatttattaaatcaaaacggtattgctcgttctgaatgggacgaaacgcgcttt
tcttacgatgcaatggccgctcaagtgagccaggcacgtgcagaactaaaaaaaatgaag
aacggaagtcgcttcgaagacgtaaagatagcatccgctcatctaaaaaccgtacaagct
caacttagacaagcgcaagataattttaaaaataccacaattactgctccctttgatgga
gtaatttcaaaaaaatacgtagaaataggtgagtggttatctgctggagcaacaatcgca
gatctagttgacttatccaaagtaagggttcaagtatcaatagcagaaaaatatatttct
cttgttcgccttaaaatgaaagccaaagttaaactagacgcatttcctggatttgaaact
tggggaaccgtttcagcgattattccaagaacagaaggactggcgcgtaattttccagta
gatcttgttatagataatcctcaagggaacatctatgagggaatgttctgtcgtgtggaa
gggatactccgcgaagacaaaggagtgttaatggtccatcgcgactcttttatccatcag
caaggaaaaataactgttgcccaagtcacaaaagaacatttagttaacatggtagaggta
gttcttggagttcgcgaaggcgaatggtttgaaatagtttcaagctctagccctttaaaa
aatgatgatatggtcgttattactaataataacaatatatacccaggtgccaaagtcatt
attaccaaaggactataa
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