Candidatus Uabimicrobium helgolandensis: UABHE_006030
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Entry
UABHE_006030 CDS
T10824
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl01501
beta-Lactam resistance
uhl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
UABHE_006030
01503 Cationic antimicrobial peptide (CAMP) resistance
UABHE_006030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uhl03036
]
UABHE_006030
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
uhl02000
]
UABHE_006030
01504 Antimicrobial resistance genes [BR:
uhl01504
]
UABHE_006030
Chromosome and associated proteins [BR:
uhl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
UABHE_006030
Transporters [BR:
uhl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
UABHE_006030
Antimicrobial resistance genes [BR:
uhl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
UABHE_006030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
HH_YBHG
BSH_CzcB
Beta-barrel_YknX
Beta-barrel_AprE
YknX_C
Beta-barrel_RND
RND-MFP_C
GpP-like_1st
LcnD_C
BSH_Fcp1
GlgS
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
XEY28086
LinkDB
All DBs
Position
8238805..8240082
Genome browser
AA seq
425 aa
AA seq
DB search
MVKTCLINILVVCALSFSSCERKEKKIPTPKIRTVECLSIVSHRTEEIITAQGIIHPYQQ
ADLAFRLSSTVVDTSSYLGEKVEKDKILAILEKNDFKLQLLRAVENKKLAQANLARIKAK
ARPEKINAAKAKLDAAHRAHDFAQKFYKSQIRLKNSQILSPLELDRLKTDSLVKEKNVQV
AEQELIFLENGSRVEDIEFAHRQVAVSDAEVKIAQQNIEYMSMKSPFAGIVSSYNLDKGE
FVIPGKVVVSVHDLYKVKLKISVSEKQISHITTGQKVQVHLDALQQKTFTGIVSYAAYSA
DSVSRTFSVEIIIDNPDLKIRSGMFATANIFIKNVREIILIPPKSILKDFDGDYVYVLSD
DPNKTKNIKVVHRRILVDKLKGQSAIVQSGLKQDEWLVISGHHYISDNEVVNCHIATEEQ
RKETE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaacgtgtttaattaatattcttgttgtatgtgctttgagcttcagctcctgc
gagcgcaaagaaaaaaaaatacctactcctaaaatacgtactgtagagtgtctttctatc
gtgtctcatagaactgaagaaatcattaccgcacaaggtatcattcatccttatcaacaa
gcagatttagcttttcgcttatcaagtacagtcgtcgatacatctagttatctcggcgaa
aaagtagaaaaagataagatactagcaatactcgaaaaaaacgactttaaactacaacta
ctcagagcagtagaaaacaaaaaacttgctcaagcaaatcttgctcgaataaaagctaaa
gcgcgaccagaaaaaataaacgcagcaaaggcaaaactagatgctgctcatagagcgcac
gactttgcacaaaaattctacaaaagccaaataagactaaaaaattctcaaattctttcg
ccacttgaactcgatcgattaaaaacagattctcttgtgaaagagaaaaatgttcaagta
gcagaacaagaattaatttttttagaaaatggatcgcgggtagaagacattgaatttgca
catcgtcaagtagccgtttccgacgccgaagtaaaaatcgctcaacaaaatatagaatat
atgtctatgaaatcaccatttgcaggtattgttagttcttataacttagataaaggtgaa
tttgtcattcctggcaaagtagtggtaagtgttcatgatctttataaagtcaaacttaaa
atttctgtatcagaaaaacaaatctcgcacataacaactggacaaaaagtacaagtgcat
cttgatgcattgcagcaaaaaacatttacaggaatcgttagctacgccgcgtatagtgca
gactctgtatctcgcacattttctgtagagatcattattgacaatccagacctaaaaatt
cgtagcggaatgtttgctacagcaaatatctttattaaaaatgtccgcgaaatcatttta
attcctccgaaaagcatactaaaagattttgatggggattatgtttatgttttatctgat
gatccgaacaaaaccaaaaatattaaagtagttcaccgtcgcattcttgtcgacaaacta
aaaggacaatctgctatcgtgcaaagtggcttaaaacaagatgaatggttggtaatttcg
gggcatcattacattagtgataatgaagtcgtaaactgccatatagctactgaagaacag
cgaaaggagacagaatga
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