Candidatus Uabimicrobium helgolandensis: UABHE_006477
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Entry
UABHE_006477 CDS
T10824
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UABHE_006477 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_006477 (nth)
Enzymes [BR:
uhl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UABHE_006477 (nth)
DNA repair and recombination proteins [BR:
uhl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UABHE_006477 (nth)
Prokaryotic type
UABHE_006477 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF2400
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XEY28517
LinkDB
All DBs
Position
complement(8824843..8825487)
Genome browser
AA seq
214 aa
AA seq
DB search
MQEKTINEIFSRWADDNPSPKIELDFVNEFTFLVAVVLSARSTDVGVNKATKSLFEVADT
PRKMYDLGEEGLKEYIKSLSLFNSKTHNVISLCNILLEKYESKVPNNFEDLLKLPGVGVK
TANIVMNYLFGDLNIAVDTHVFRVCNRTGLANEKNEKNTEAVLVKVVPDKWKKNAHLWLI
LHGRYVCKAKNPECTKCIIKDLCEYKEKELNSSL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaaacaataaatgaaatatttagtcggtgggctgatgacaatccttcaccc
aaaatcgaactggatttcgttaatgaatttacttttctcgttgcagtagttttatctgct
aggtctacggatgtaggagtgaacaaagcgacaaagagtttgtttgaagtagcagatact
cctcgaaaaatgtacgatttaggagaagaaggtctgaaagagtatattaaatctttaagt
ctatttaactctaagacgcataatgttatttctttgtgtaatatattactagaaaaatat
gagagtaaagttcctaacaattttgaagatttattaaagctaccaggagttggagtaaaa
acagcgaatattgttatgaattatttatttggtgatctcaatattgctgtagatactcac
gtttttagagtatgtaatcgcaccggtttagcaaatgaaaaaaacgaaaaaaacacagaa
gcagtacttgtaaaagtagtaccagacaagtggaaaaaaaatgcgcatttgtggttaatt
cttcatggaagatatgtatgtaaagcgaaaaatccagagtgtacaaaatgtataataaaa
gatctctgcgaatataaggaaaaagagttgaatagttctctataa
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