Urbifossiella limnaea: ETAA1_52540 Help Entry ETAA1_52540       CDS       T07028                                  Symbol ligA_2 Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism uli  Urbifossiella limnaea Pathway uli03030   DNA replication uli03410   Base excision repair uli03420   Nucleotide excision repair uli03430   Mismatch repair Brite KEGG Orthology (KO) [BR:uli00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ETAA1_52540 (ligA_2)    03410 Base excision repair     ETAA1_52540 (ligA_2)    03420 Nucleotide excision repair     ETAA1_52540 (ligA_2)    03430 Mismatch repair     ETAA1_52540 (ligA_2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:uli03032]     ETAA1_52540 (ligA_2)    03400 DNA repair and recombination proteins [BR:uli03400]     ETAA1_52540 (ligA_2) Enzymes [BR:uli01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ETAA1_52540 (ligA_2) DNA replication proteins [BR:uli03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ETAA1_52540 (ligA_2) DNA repair and recombination proteins [BR:uli03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ETAA1_52540 (ligA_2)    NER (nucleotide excision repair)     GGR (global genome repair) factors      ETAA1_52540 (ligA_2)    MMR (mismatch excision repair)     DNA ligase      ETAA1_52540 (ligA_2)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ETAA1_52540 (ligA_2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 HHH_5 PTCB-BRCT Nlig-Ia DNA_ligase_ZBD BRCT_2 HHH Acetyltransf_6 DUF4431 Zn_ribbon_ISL3 Motif Other DBs NCBI-ProteinID:  QDU23260 UniProt:  A0A517Y0H8 LinkDB All DBs Position complement(6318627..6320663) Genome browser AA seq 678 aa AA seqDB search MPKPAARAAELRTLIDHHNHRYYVDAAPEISDRDFDRLLDELTQLEAKHPELATPDSPTR RVGGAPVDALTSVRHRQPMYSIENSYNPDMLREWDTSVRKALGKEAVTYVVELKIDGVAM SLSYEHGLLTRGVTRGDGDAGDDVTHNVRTVGGVPLKLRSDKPPALYEVRGEVYLTRAEL IRINRERVAAGDKPYENCRNLTAGSIRMLDPQEVARRKLRFFAYALGALDGFAVTSHLAS LEAMKAFGFPVNPETKHFPDIDGVIAHCAEWNTKRHDLGYDTDGMVVKVDDFSQRERLGY TSKFPRWARAFKFEAEQAMTKLARVEVQVGRTGKLTPVAHFDPPVRLAGTTVSKASLHNA DEMERKDVRVGDTVVVEKAGEIIPQVVRVETAARTGAETKFAWPTACPVCGAATKRDEGS PFYFCTAPRGACGGQLKRQLLQFARRAAMDIEGLGEAVVDELLAADLVETLPDLYRLTKE DLLKARPPKDAKKASGKWADNLLDGIQASKPRGLARVLAGISVPGVADSMADILAQEFLT IDALLAATDEQLLAAEGVGPERAKGIRAFFEADATRNMIADFRELGLTLTEEKRAAAATA AGLPLQGKTVVVTGTLTRYGREEIEDVIRKAGGKPSGSVSKKTDYLLAGEKAGSKLDKAK ELGVAVLTEDDFDALIGK NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atgcccaagcccgccgcccgcgccgccgagctccgcacgctcatcgaccaccacaaccac cgctactacgtcgacgccgcgcccgaaatctccgaccgcgacttcgaccgcctcctcgac gaactcacgcagctcgaagcgaagcaccccgaactcgccacgcccgacagccccacccgc cgcgtcggcggcgccccggtggacgcgctcacctccgtccgccaccgccagccgatgtac agcatcgagaacagctacaacccggacatgctccgcgagtgggacacctccgtccgcaag gcgctcggcaaggaggcggtcacctacgtcgtcgagctcaagatcgacggcgtggccatg tcgctgagctacgagcacggcctgctgacgcgcggcgtcacccgcggcgacggcgacgcc ggcgacgacgtgacgcacaacgtccgcaccgtcggcggcgtgccgctgaagctgcgttcc gacaagccgccggcgctgtacgaggtccgcggtgaggtgtacctgacgcgcgccgaactg atccgcattaaccgcgagcgcgtggccgcgggcgacaagccgtacgagaactgccgcaac ctcacggcgggttcgatccgcatgttggacccgcaggaggtggcgcggcgcaagctccgc ttcttcgcctacgcgctcggcgccctcgacggcttcgccgtcacgtcgcacctcgcgtcg ctggaggcgatgaaggcgttcggcttcccggtgaacccggaaacgaagcacttccccgac atcgacggcgttatcgcccactgcgcggagtggaacacgaagcggcacgacctgggctac gacaccgacggcatggtcgtgaaggtggacgacttctcgcagcgcgagcggctcggctac acgagcaagttcccgcgctgggcgcgggcgttcaagttcgaggccgagcaggcgatgacc aaactggcccgcgtcgaggtgcaggtgggtcgcaccggtaagctcacgccggtggcgcac ttcgacccgccggtgcggctggccggcaccaccgtcagcaaggcgagcctgcacaacgcc gacgagatggagcggaaggacgtccgagtcggcgacacggtcgtggtcgagaaggccggc gagatcatcccgcaggtggtgcgcgtggagacggccgcccgcaccggcgcggaaacgaag ttcgcgtggccgacggcgtgcccggtttgcggcgccgccacgaagcgcgacgaggggagt ccgttctacttctgcaccgccccgcgcggcgcctgcggcggccagttgaagcggcagttg ctccagttcgcccgccgcgccgcgatggacatcgaggggctcggcgaggcggtggtcgac gagctcctcgccgccgatctggtggaaacgctgccggacctgtaccgcctcacgaaggag gacttgctgaaggcccgaccgccgaaggacgccaagaaggcgagcggcaagtgggccgac aacctgctcgacggcattcaggcgagcaagccgcgcgggctggcgcgggtgctcgccggc atcagcgtccccggcgtcgccgacagcatggccgacatcctggcgcaggagttcctgacc atcgacgcgctgctggccgcgaccgacgagcaattgttggccgccgagggcgtggggccg gagcgggcgaaggggattcgcgcgttcttcgaggcggacgcgacgcggaacatgatcgcc gacttccgcgagctggggctgacgctgacggaggagaagcgggccgcggcggcgacggcg gcggggctgccgttgcaggggaaaaccgtggtggtaaccgggacgctgacgcggtatggc cgggaggagatcgaggacgtgatccgcaaggcgggcggcaagccgagcggcagcgtgagc aagaagacggactacctgctggccggcgagaaggccggcagcaagctggacaaggcgaag gaactgggcgtcgcggtgctgaccgaggacgacttcgacgcgctgatcgggaagtga

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