KEGG   Mycosarcoma maydis: UMAG_03153
Entry
UMAG_03153        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
uma  Mycosarcoma maydis
Pathway
uma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UMAG_03153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uma03019]
    UMAG_03153
Messenger RNA biogenesis [BR:uma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     UMAG_03153
SSDB
Motif
Pfam: Lysine_decarbox ABC_tran LDcluster4 AAA_21 AAA_29 AAA_25 AAA_28 RsgA_GTPase AAA_16 AAA_15 MMR_HSR1 nSTAND3 Arf AAA_22 AAA_23
Other DBs
NCBI-GeneID: 23563704
NCBI-ProteinID: XP_011389615
UniProt: A0A0D1DYA0
LinkDB
Position
8:83427..85094
AA seq 555 aa
MPGYTDSICVFCGSSPGVKPEYMAAAASVGHAIARHNYRLVYGGGSRGCMSGVSQAVLEV
GGHVLGVIPQVMAATVPAGHPGQNLAAPKVVSKEGVGPTVLNPDAGTGHIETIVVQSMHE
RKQRMAAESNLGFIGLPGGYGTFEEVMEMVTWTQLGIHRKPMVLLNVNGFYTPIKQQIEL
AVEDGFIAKDGKQLISFVECDASNIDACGDKVLAEAVRLSNELASNGWGYWDWNKPQGPI
STAKGGISDNAANKSLELADGETLAVQVSDLTFTFNPDMPPALEHCNLSLKRGSRCLLIG
ANGAGKSTLLRLLAGKKLCDSKVRVFGKDVFRESPSGVTYLGTEWAMNPVVRSDIVVSAF
LDSVGGYRHKARRDRLLDILDVDLTWHMHAISDGERRRVQLCMGLMEPWDLLLLDEVTVD
LDVQVRADLLDFLQQETEERHATIIYATHIFDGLQSFPTHLAHMRLGTTTTTLPIDWPAT
NAADIAALPPTAAADKTRDLSPLLNVSLAWLREDKVVRAEQEAKRGRVRGANRQNETTDS
EKFFSKYDYSQSVTR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgcctggatacaccgactcgatatgtgtcttttgcggctcctcgcctggcgtcaagccc
gaatacatggcggccgcagctagcgtcggccacgccattgccaggcacaactaccgtctc
gtctatggaggtggttcgcgcggctgcatgagcggtgtctcccaagctgtccttgaagta
ggcggtcacgtcctcggcgtcatcccccaagtcatggccgccaccgtccctgcgggtcat
cctggacaaaatctggcggcccccaaggtcgtctccaaggaaggtgtcggccctaccgtg
ctcaatcccgacgcaggcacaggtcatatcgaaaccatcgtcgtccagtccatgcacgaa
aggaagcagcgcatggctgccgaaagcaacctcggctttattggccttcctggtggatac
ggcactttcgaagaggtcatggagatggtcacttggacccagcttggtatccaccgaaag
cccatggttctgctcaacgtcaacggcttctacacccccatcaagcagcaaatcgagctt
gctgtcgaggacggcttcatcgccaaggatggaaagcagctcatcagctttgtcgagtgc
gacgcttccaacattgatgcctgcggtgataaggtgctcgcggaagcagttcgcctctcc
aacgagcttgcttcaaatggctggggctactgggactggaacaagcctcagggacccatc
agtaccgccaaaggtggcatcagcgacaacgctgctaacaagtctctcgaactcgctgac
ggcgaaacgctcgctgtacaagtgtccgacctgactttcaccttcaacccggacatgcca
cctgcgctcgaacactgcaatctcagcctgaagcgtggctcgcgctgtcttcttatcggt
gccaacggtgctggcaagtcgacactcttacgtctgctcgccggcaaaaagctgtgcgac
tccaaggtgcgcgtgtttggcaaggatgtcttccgcgagtctccttccggcgttacgtat
ctcggcaccgagtgggccatgaatccggttgtgcgctctgacattgtcgtctccgctttc
ctcgattcagtcggcggctaccgtcacaaggcgcgtcgcgatcgtctgctcgacattctt
gatgtcgatctcacgtggcacatgcacgccatctcggatggtgaacgacgacgtgttcag
ctgtgcatgggtctcatggagccctgggacctgctcctgctcgacgaagtgactgtggat
ctggatgtccaagttcgcgcggatctgctcgactttctgcagcaagagaccgaggagagg
catgcgaccatcatctacgccactcacatctttgacggattgcagagcttccccactcat
ctggctcatatgcggctgggaacgactacgaccactttgccgatcgattggcctgccacc
aacgcggctgatatcgcggcgctgccacccactgcggctgctgacaagaccagagacctg
tcgccattgctcaacgtctcgctcgcttggttgagagaggacaaggtggtgcgcgccgag
caagaggctaagcgcggcagagtcagaggtgccaaccgccaaaacgagaccaccgactcg
gagaaattcttcagcaagtatgattactcgcagtcagtcacacgctag

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