Mycosarcoma maydis: UMAG_03153
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Entry
UMAG_03153 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_03153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_03153
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UMAG_03153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lysine_decarbox
ABC_tran
LDcluster4
AAA_21
AAA_29
AAA_25
AAA_28
RsgA_GTPase
AAA_16
AAA_15
MMR_HSR1
nSTAND3
Arf
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
23563704
NCBI-ProteinID:
XP_011389615
UniProt:
A0A0D1DYA0
LinkDB
All DBs
Position
8:83427..85094
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AA seq
555 aa
AA seq
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MPGYTDSICVFCGSSPGVKPEYMAAAASVGHAIARHNYRLVYGGGSRGCMSGVSQAVLEV
GGHVLGVIPQVMAATVPAGHPGQNLAAPKVVSKEGVGPTVLNPDAGTGHIETIVVQSMHE
RKQRMAAESNLGFIGLPGGYGTFEEVMEMVTWTQLGIHRKPMVLLNVNGFYTPIKQQIEL
AVEDGFIAKDGKQLISFVECDASNIDACGDKVLAEAVRLSNELASNGWGYWDWNKPQGPI
STAKGGISDNAANKSLELADGETLAVQVSDLTFTFNPDMPPALEHCNLSLKRGSRCLLIG
ANGAGKSTLLRLLAGKKLCDSKVRVFGKDVFRESPSGVTYLGTEWAMNPVVRSDIVVSAF
LDSVGGYRHKARRDRLLDILDVDLTWHMHAISDGERRRVQLCMGLMEPWDLLLLDEVTVD
LDVQVRADLLDFLQQETEERHATIIYATHIFDGLQSFPTHLAHMRLGTTTTTLPIDWPAT
NAADIAALPPTAAADKTRDLSPLLNVSLAWLREDKVVRAEQEAKRGRVRGANRQNETTDS
EKFFSKYDYSQSVTR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatacaccgactcgatatgtgtcttttgcggctcctcgcctggcgtcaagccc
gaatacatggcggccgcagctagcgtcggccacgccattgccaggcacaactaccgtctc
gtctatggaggtggttcgcgcggctgcatgagcggtgtctcccaagctgtccttgaagta
ggcggtcacgtcctcggcgtcatcccccaagtcatggccgccaccgtccctgcgggtcat
cctggacaaaatctggcggcccccaaggtcgtctccaaggaaggtgtcggccctaccgtg
ctcaatcccgacgcaggcacaggtcatatcgaaaccatcgtcgtccagtccatgcacgaa
aggaagcagcgcatggctgccgaaagcaacctcggctttattggccttcctggtggatac
ggcactttcgaagaggtcatggagatggtcacttggacccagcttggtatccaccgaaag
cccatggttctgctcaacgtcaacggcttctacacccccatcaagcagcaaatcgagctt
gctgtcgaggacggcttcatcgccaaggatggaaagcagctcatcagctttgtcgagtgc
gacgcttccaacattgatgcctgcggtgataaggtgctcgcggaagcagttcgcctctcc
aacgagcttgcttcaaatggctggggctactgggactggaacaagcctcagggacccatc
agtaccgccaaaggtggcatcagcgacaacgctgctaacaagtctctcgaactcgctgac
ggcgaaacgctcgctgtacaagtgtccgacctgactttcaccttcaacccggacatgcca
cctgcgctcgaacactgcaatctcagcctgaagcgtggctcgcgctgtcttcttatcggt
gccaacggtgctggcaagtcgacactcttacgtctgctcgccggcaaaaagctgtgcgac
tccaaggtgcgcgtgtttggcaaggatgtcttccgcgagtctccttccggcgttacgtat
ctcggcaccgagtgggccatgaatccggttgtgcgctctgacattgtcgtctccgctttc
ctcgattcagtcggcggctaccgtcacaaggcgcgtcgcgatcgtctgctcgacattctt
gatgtcgatctcacgtggcacatgcacgccatctcggatggtgaacgacgacgtgttcag
ctgtgcatgggtctcatggagccctgggacctgctcctgctcgacgaagtgactgtggat
ctggatgtccaagttcgcgcggatctgctcgactttctgcagcaagagaccgaggagagg
catgcgaccatcatctacgccactcacatctttgacggattgcagagcttccccactcat
ctggctcatatgcggctgggaacgactacgaccactttgccgatcgattggcctgccacc
aacgcggctgatatcgcggcgctgccacccactgcggctgctgacaagaccagagacctg
tcgccattgctcaacgtctcgctcgcttggttgagagaggacaaggtggtgcgcgccgag
caagaggctaagcgcggcagagtcagaggtgccaaccgccaaaacgagaccaccgactcg
gagaaattcttcagcaagtatgattactcgcagtcagtcacacgctag
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