Ursus maritimus (polar bear): 103666662
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Entry
103666662 CDS
T03271
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr05014
Amyotrophic lateral sclerosis
umr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103666662
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103666662
05022 Pathways of neurodegeneration - multiple diseases
103666662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103666662
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103666662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RL
RRM_5
Motif
Other DBs
NCBI-GeneID:
103666662
NCBI-ProteinID:
XP_040501699
UniProt:
A0A8M1H5E1
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NSQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaatgacgagcccattgaaataccatca
gaagacgatgggacagtgctgctgtccacagttacagcccagtttcccggggcatgtggg
ctacgctacaggaatccagtgtcccagtgtatgagaggtgtccggctggtagaaggaatt
ctgcatgccccggatgctggctggggaaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggatgagacagatgcttcatcagcagtgaaagtgaaaagagctgtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacgactgaacaggatcta
aaagaatattttagtacctttggagaagttcttatggttcaggtcaagaaagatattaaa
accggtcattcaaaggggtttggctttgttcgttttacggaatacgaaacccaggttaaa
gtaatgtcacagcgacatatgatagatggacggtggtgtgactgtaaacttcctaattct
aagcaaagcccagatgagcctctgagaagcaggaaggtgtttgtcggacgttgtacggaa
gacatgactgccgacgagctgcgccagttcttctgccagtacggggaagtggtagacgtc
ttcattcccaaaccattcagggcctttgcctttgttacgtttgcagacgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtgggttcggtaacagtagagggggtggagctggtttggga
aacagtcaaggtagtaatatgggtggagggatgaactttggcgcctttagcattaatcca
gccatgatggccgcggcccaggcggcgctgcagagcagctggggcatgatgggcatgttg
gccagtcagcagaaccagtcgggcccatcaggtaacaaccaaagccaaggcaacatgcag
agggagccaaatcaggcctttggttctggaaataactcctatagcggttctaattcaggt
gcagcaattggctggggatccgcatcgaatgcagggtcaggcagtggttttaatggaggg
tttggctcaagcatggattctaaatcttctggctgggggatgtag
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