Ursus maritimus (polar bear): 103682088
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Entry
103682088 CDS
T03271
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04512
ECM-receptor interaction
umr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103682088 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103682088 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
umr00535
]
103682088 (AGRN)
Proteoglycans [BR:
umr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103682088 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
103682088
NCBI-ProteinID:
XP_040501509
UniProt:
A0A8M1H5A3
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MASLWPSGSAPLQPLLLLLVVAARALPSADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSCKVRVWRYLKGKDMVTQESLLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEEVEHCVEDKPGTHFTPAPPTPPDACRGMLCG
FGAVCEPGAEGSGRASCVCKKSACPAVVAPVCGSDASTYSNECELQRAQCDQQRRIRLLR
RGPCGSRDPCANVTCGFGSSCVRSADGHTATCLCPATCQGPPEGPVCGSDGSDYPSECQL
LRHACARQENIFKKFSGPCDPCQGARDDPSRVCRVHPRTRRPEMLLRPESCPPRQAPVCG
DDGVTYDNDCIMGRTGAARGLLLQKVRSGQCQPQDQCPDVCRFNAVCLSRRGRPRCSCDR
VICDGAYRPVCAHDGHTYDSDCWRQQAECQQQRPIPAKHQGPCDQPLSPCLGVQCPFGAS
CAVKNGEAECVCQQACSGIYDPVCGSDDVTYGSTCELEATACALGREIRVARRGPCDRCG
QCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYASECELHVHACTHQISLHVVSAGH
CQTCGDTVCAFGAVCLAGQCVCPRCERPPPGPVCGSDGVTYDSACHLREAACQHQTQIEE
ARAGPCEQAECGSGGSGSGEDGECEQELCRQHGGVWDEDSEDGPCVCDFSCHSVLRSPVC
GSDGVTYGTECELKKARCESQRELYVTAQGACRGPTLAPLPPAVPPHCTQTPYGCCRDNI
TAARGVGLAGCPSSCHCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPAGHALGPGGCETDSLAP
ETCAEMRCEFGASCVEEAGSARCVCPTSTCPEATAPKVCGSDGVTYGNECQLRTIACRQG
LAISIQSLGPCQDAVAPGARPTSIPVATSGLNVSKALPSPPSALPLAPSSTPHSQPTPRP
SPGPWTAASIPRTTPRPMLTMPPTAPATAASLTTSAFGESGSADGSGDEGLSGDLEASGT
GSGGLEPPEGGSAVTPGPPMERASCYNSPLGCCSDGKTPSLDTEGSNCPATKAFQGVLEL
EGVEGQELFYTPEMADPKSELFGETARSIENTLDDLFRNSDVKKDFRSVRLRDLGPGSSV
RAIVDVHFDPATTFRASDVAQALLRQIQASRRRSLGVRRPPQEHVRFMDFDWFPAFFMGA
TTGATPAAATARATTVAHLPSAVTQRARYPSHTSRPVGRTTALPTTRQPPTTAPRRVPGR
RPLPPGTQQPPKPCDSQPCLHGGTCQDQDSGGSFTCSCPVGRGGAVCEKALHPSVPAFGA
RSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNAQGKDFLALTLLGGRVQLRFDTGSG
PAVLTSSVPVQPGRWHRVELSRHWRRGTLSVDGETPVLGHSPSGTDGLNLDTDLFVGGVP
ADQASVVLERTSIRVGLRGCIRLLDVNNQRLELSSWQGAVTQSSGVGECGDHPCLPNPCL
GGAPCQALEAGMFHCQCPPGRFGPTCSDDKNPCEPNPCHGAAPCRVLPDGEAKCECPQGR
GGAICQTVSERDYSQPFLADFHGFSYLELKGLHTFERDLGEKMALEVVFLARGPSGLLFY
NGQKTDGKGDFVSLALHDRFLEFRYDLGKGAAVIRSKEPVALDTWTRVSLERNGRKGAMR
VSDGPRVLGESPVPHTVLNLKEPLYVGGVPDFSKLARAAAVSSGFDGVIQLVSLKGHQLL
TQEHVMRSVDVSSFAHHPCTQASGHPCLNGASCLPREASYECLCPGGFSGLHCEKGLIEK
SAGDLDALAFDGQTYIEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYV
ALAIVDGRLQLTYDLGSQPVVLRSTVPVNTNRWLRVRAHREQREGSLQVGNEAPVTGSSP
LGATQLDTDGALWLGGLEKLPMGQALPKAYGTGFVGCLRDVVVGRRPLHLLEDAVTKPEL
RPCAAP
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgtggccgtccggctcggccccgctgcagccgctactgctgctcctggtg
gtggccgcgcgtgccctgcccagcgccgacgggacgtgcccggaacgcgcgctggagcgg
cgggaggaggaggcgaatgtggtgctcaccggcacagtggaggagattctcaacgtggac
ccggtgcagcacacgtactcgtgcaaggttcgagtctggcggtacttgaagggcaaagac
atggtgacccaagagagcctgcttgacggtggcaacaaggtggtgattggcggctttgga
gaccccctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaac
cccgcacccccatacctgtggccggcccataaaaatgagctgatgctcaattccagcctc
atgcgcatcaccctgcggaatctggaggaagtggagcactgtgtggaagacaaacctggg
acccacttcacaccagcacccccaacgcctccggatgcgtgccgaggcatgttgtgtggc
ttcggtgcagtgtgcgagcccggagcagagggttcgggccgagcctcctgcgtgtgcaag
aagagcgcgtgtcccgccgtggtggcgcccgtgtgcggctccgacgcctccacctacagc
aacgagtgcgagctgcagcgggcgcagtgcgaccagcagcgccgcatccgccttctccgc
cgcgggccctgcgggtcccgggacccctgcgccaacgtgacgtgcggcttcggcagctcc
tgtgtgcgctcggcagacgggcacacagccacgtgcctgtgccctgccacctgccagggg
ccccccgaaggtccggtgtgtggcagcgacggttctgactaccccagcgagtgccagctc
ctgcgccacgcctgcgcacgccaggagaacatcttcaagaagttcagcggcccttgcgac
ccctgccagggcgcccgcgatgaccccagccgtgtctgccgcgtccacccacgcacgcgg
cgccctgagatgctcctgcggccagagagctgtcctcctcggcaagcccccgtgtgcggg
gatgatggggtcacctatgacaacgactgcataatgggccgcacgggagctgcccgtggc
cttctcctccaaaaagtgcgctctggccagtgccagcctcaagaccagtgcccagatgtg
tgcaggttcaatgccgtgtgcctgtcccgccgaggccgcccccgctgctcctgcgaccgc
gtcatctgtgacggggcttaccgacccgtgtgtgcgcatgatgggcacacatatgacagt
gactgctggcgccagcaggctgagtgtcagcagcagcgtcccatccctgccaagcaccag
ggcccgtgtgaccagcccctgtccccctgccttggggtgcagtgcccctttggggcatcg
tgtgctgtgaagaacggggaagctgagtgtgtgtgccagcaggcgtgctcgggcatctat
gatcctgtgtgcggcagcgatgacgtcacgtatggcagcacgtgtgagctggaagccaca
gcctgcgcccttggacgggagatccgggtggctcgccgaggaccctgtgaccgctgcggg
cagtgccgcttcggagctctgtgtgaggctgagaccgggcgctgcgtgtgcccctccgag
tgcgtggccttggctcagcccgtgtgcggttccgacgggcacacgtatgccagcgagtgt
gagctgcacgtgcacgcctgcacacaccagatcagcctgcacgtggtctcggctggacac
tgccagacctgtggagacacagtgtgtgctttcggggcagtgtgcttggctgggcagtgt
gtgtgtccccggtgtgagcggcccccacccggccccgtgtgtggcagcgatggtgtcacc
tacgacagtgcgtgtcatctccgagaggccgcctgccagcaccagacccagatcgaggag
gcccgggcggggccctgtgagcaggctgagtgcggctccggaggctctggctctggagag
gacggcgagtgtgagcaggagctctgccggcagcacggcggcgtctgggacgaggactcg
gaagatgggccgtgcgtctgtgacttcagctgccatagcgtcctgaggagcccggtctgc
ggctcagatggggtcacctatggcaccgagtgtgagctgaagaaggccaggtgcgagtcg
cagcgagaactgtacgtcacggcgcagggagcctgccggggccccaccttggccccgctg
ccacctgcggttcccccgcactgcacccagaccccctatggctgctgccgggacaacatc
actgcggcccggggcgtgggcctggctggctgccccagctcctgccattgcaacccacat
ggctcctacagtggcacctgtgacccagccacgggtcagtgctcctgccgcccgggggtc
gggggcctcaagtgtgaccgctgtgagcctggcttctggaacttccgtggcattgtcact
gacggccggagcggctgcaccccctgcagctgtgacccccggggcgctgtgcgagacgac
tgtgagcagatgaccgggctgtgctcatgtaagcctggggtggccggacccaagtgcggg
cagtgtccagctggccacgccctgggccctggtggctgtgaaacagactccttggcgcct
gagacgtgtgctgagatgcgctgtgagtttggggcatcctgcgtggaggaggctggctct
gcacgctgcgtgtgccccacatcgacctgtccggaggccactgctcccaaggtctgtggg
tcggatggagtgacctacggcaacgagtgccagctgaggaccatcgcctgtcgccagggc
ttggccatctccatccagagccttggcccgtgccaggacgctgttgctcctggcgcccgc
ccaacgtctatacccgtggccacgtcggggctcaacgtgagcaaggcactgccatccccc
cccagcgccctccccctggctcccagcagcacccctcacagccagcccactcctcgaccc
tcgccaggaccttggaccgctgccagcatccccaggactaccccgaggcccatgctgacc
atgccccccacagccccggccacggcagccagccttaccacatccgcctttggtgaatct
ggcagtgccgacgggagcggcgatgagggactgagtggtgacctggaggccagtgggact
ggctcagggggactcgagcctcccgaaggtggcagtgctgtgacccctgggccacccatg
gagagggcttcgtgctacaactcgcctttaggctgctgctcagatggcaagacgccctcg
ctggacacagagggttcgaactgtcctgccaccaaggcgttccagggcgtactggagctt
gagggggtcgaggggcaagagctgttctacacgccggagatggccgaccccaagtcagag
ctttttggggagaccgctaggagcatcgagaacacactggatgacctcttccggaactcg
gatgttaagaaggacttccgaagcgtccgcctgcgggacttggggcctggcagctccgtc
cgagccattgtggacgtgcacttcgaccctgccacaacctttagggcgtccgacgtggcc
caggccctgctccggcagatacaggcgtccaggcgccggtcgctgggggtaaggcggcca
ccgcaggagcacgtacgctttatggacttcgactggtttcccgcgttcttcatgggggcc
accacaggagccacacccgccgcagccacggccagagccaccactgtagcccacctgcct
tctgctgtgacccagcgggcccgctaccccagtcacacaagccggcctgttggcaggacc
acagccctgcccaccacacgccagccccccaccactgccccccgtcgtgtgcctggacgc
cggcccttgcccccaggcacccagcagccaccaaagccctgtgactcccagccctgcctc
cacgggggaacctgccaggaccaggactcgggtggcagcttcacctgcagctgcccagtg
ggcagggggggtgccgtctgtgagaaggcgctgcacccctctgtgccagccttcggggcc
cgctccttcctggccttccccaccctccgtgcctaccacacactgcgcctggcgctggag
ttccgggcgctggagccgcagggtctgctgctctataacgggaacgcccagggcaaggac
ttcctggcgctgacgctgctggggggccgcgtgcagctcaggtttgacaccgggtcaggg
cccgccgtgctgaccagctccgtgcctgtacagcccggccgctggcatcgcgtggagctg
tctcggcactggcgccggggtacgctctcggtggatggcgagacccctgttctgggccac
agccccagtggcaccgatggtctcaacctggacacagacctctttgtgggcggcgtcccg
gcggaccaggcttccgtggtgctcgaaaggacctccatccgtgttggcctcaggggctgc
atccgcctactggacgtcaataaccagcggttggagctcagcagctggcagggggctgtt
acgcaaagctctggggtgggcgagtgcggggaccacccctgcctgccgaacccctgcctc
ggcggggccccgtgccaggccctggaggctggcatgttccactgtcagtgcccaccgggc
cgctttggtccaacctgtagtgatgacaagaacccctgtgagccgaacccctgccatggg
gcagccccctgccgcgtgttgcctgacggggaggccaagtgcgaatgcccccagggacga
gggggcgccatctgccagacagtctccgagcgggattattcccagcccttcctggctgac
ttccacggcttctcctacctggagctgaaaggcttgcacacctttgagcgggacctaggg
gagaagatggcactggaggtggtgttcttggcgcgtggccccagcggtctgctcttctac
aatgggcagaagacagacggcaagggggactttgtgtccctggcgttgcatgaccgcttc
ctggagttccgctatgacctgggcaagggggcagcggtcatcaggagcaaggaacctgtg
gccctggacacctggaccagggtctcactggagcgcaatggccgcaagggcgccatgcgt
gtcagtgatgggccccgcgtgctgggcgagtctccggtgccacacactgtcctgaatctg
aaggagcctctctacgtcggcggggtgcctgacttcagcaagctggcccgggcagccgcg
gtgtcctccggcttcgacggcgtcatccagctggtctccttgaaaggccaccagctgctg
acccaggagcacgtgatgcggtccgtggatgtctcatcttttgcccaccacccttgtacc
caggcctcaggccacccgtgcctcaatggggcctcctgcctccctcgggaggcctcctat
gagtgcctgtgtcctgggggcttctcggggcttcactgcgagaaggggctgattgagaag
tcggcaggggacctggacgccctggccttcgacggacaaacctacattgagtacctcaat
gccgtgactgagagtgagaaggccctgcagagcaaccactttgagctgagcctgcgcacg
gaggccacacaggggctggtgctgtggagcggcaaggccacggagcgggctgactacgtc
gcactggccattgtggacgggcgcctgcagctgacctatgacttgggctcccagcctgtg
gtgctacgctccaccgtgccggtcaacaccaaccgctggttgcgggtcagggcacacagg
gaacagagggaaggttcccttcaggtgggcaacgaggcccccgtgactggctcttccccg
ctgggtgccacgcagctagacacagacggagccctatggttgggtggcctggagaagctg
cccatgggccaggccctgcccaaggcctacggcacaggcttcgtgggctgcctacgggac
gtggtggtgggtcggcgcccgctgcacctgctggaggatgctgtcaccaagccagagctt
cggccctgtgccgccccatga
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