Uncinocarpus reesii: UREG_01472
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Entry
UREG_01472 CDS
T01132
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein)
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ure
Uncinocarpus reesii
Pathway
ure03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UREG_01472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ure03041
]
UREG_01472
Spliceosome [BR:
ure03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
UREG_01472
Complex C
U5 SnRNP specific factors
UREG_01472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
8440726
NCBI-ProteinID:
XP_002541956
UniProt:
C4JID5
LinkDB
All DBs
AA seq
988 aa
AA seq
DB search
MDDLYDEFGNYIGGAEESEEEEQHGEVPARAYAYESESEEGEEASAAPDQQLMEIDEQGP
SNAVVLHEDKQYYPTAQQVYGTEVETLVEEEDAQPLSQPIIAPVQQKKFAVQEADLPPVF
YSREFMTDMLNFPDQIRNIALVGHLHHGKTAFMDTLVMETHDIAAKLDRRTGKARDEQLR
YTDVHLLERERGLSIKSSPMSLVLQGTKGKSYLLNILDTPGHVNFVDEVAASLRLVDGVV
LVVDVVEGVQINTEQIIKYAVLEDLPLTLVVNKMDRLILELKLHPTDAYFKLKHVIEEVN
TVIEKTLPGQGERRRLSPEKGNVAFACTAMNWCFTLQSFAKMYADTYSKIDISEFAIRLW
GDIFYSPKSRKFTRKGVEESSKRSFVHFVLEPIYKIFSHTISESPEDLKETLATLGISLK
PSQLKSDAKVLLNLVCEQFFGPVGGFVDMIVEHIPSPLEGAPKFLEKYYTGPLDTKVAAG
MSSCDQNGQLVVHVTKLFNTVDAAGFHAFGRIMSGTARPGQQVRVLGQEYTVDDEEDMLV
ATIIDTFIAESRYNIPTSGVPAGNWVLLSGIDNSIVKTATLVPLRLEDDEDAYIFKPIHH
MTESVFKVAVEPINPSELPKMLEGLRKVNKSYPLISTKVEESGEHIVLGTGELYMDCVLH
DLRRLYAEMELKVSDPVTRFCETVVETSAIMCYAMTPNKKNKITMVAEPLDDGIAEDIEA
GHVRIRDPTRKVAKFFEEKYDWDKLAARSIWAFGPDDMGPNILQDDTLPSQVDKKQLATV
RDSIRQGFSWGTREGPLCEEPIRNTKFRLTDISLADQAIFRGGGQIIPTARRAIYSSFLM
ASPRLMEPIYTCSMIGPADSVASIYTVLSRRRGHVLTDGPIAGTPLYSVRGLIPVIDSFG
FETDLRIHTQGQATVSLVFDKWSVVPGDPLDREVKLRPLEMASAMATARDFVLKTRRRKG
LAEDVTVSKFLEPELWKGLKESGILGEG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctctacgacgagtttggaaactacatcggaggcgcggaagagagtgaggag
gaagagcagcatggcgaggtgcccgcacgggcatatgcctatgaatcggagtcggaggaa
ggagaagaagcttcagctgctccggaccagcaattgatggaaatagatgaacagggcccc
tcgaatgccgtcgtccttcatgaagacaagcaatattatcctaccgcgcaacaggtttac
gggactgaggttgaaaccttagtagaggaagaagatgcacaaccattatcccaacctatc
atcgcccccgtgcaacagaagaaatttgccgtacaggaagcagatctacccccggtgttt
tattcgcgcgagttcatgacggatatgttgaatttccccgaccaaatacgaaatattgcg
ctagtgggccatttgcatcacggaaaaaccgccttcatggacaccctagtaatggagacg
catgacatcgccgcgaaactcgatcgaaggacaggaaaagcaagggatgaacagctacga
tacactgatgtgcacctccttgaacgggaaaggggcctttctataaaatcgtcgccaatg
agcctggtattacaggggacgaaggggaagtcctacctgctcaacatcttggatacaccc
ggccatgtcaattttgtcgacgaagtagcagcttcactcagattggtcgatggcgttgtt
ctagttgtggatgtggtggaaggcgtccagattaacactgaacagatcatcaaatacgct
gtcctcgaagatcttcctctcacgctggtcgtgaataaaatggatcgcctgattcttgaa
ctcaagctacatccaaccgatgcttatttcaagctcaaacatgtgatcgaagaagtcaac
acagttatcgagaaaacactacctgggcagggagaacggaggagactgagtcccgagaag
ggcaatgtggcatttgcgtgcactgcaatgaactggtgctttacccttcaatcatttgcg
aagatgtacgcggatacatactctaagatcgacatctctgaattcgccattcgtctgtgg
ggagacatcttttatagcccaaagagcaggaaattcacaagaaaaggggtagaagagtct
tcgaaacggtcgtttgtccacttcgttctggaacccatttataaaatattctcccatacg
ataagcgagagcccagaagatctgaaggagacccttgccacgcttggaatcagcttaaag
ccctcacagctcaaatcagatgcaaaggttcttttgaatttagtatgtgaacagtttttt
gggcctgttgggggcttcgtggatatgatcgtggaacacattccctcgccattagaaggt
gccccgaaatttcttgagaaatattatactggcccactcgacacaaaggttgccgctgga
atgtcttcctgcgaccaaaacggccagctcgtcgttcatgtcacaaaactatttaatacc
gttgacgctgcgggctttcacgcgtttgggagaattatgagtggcacggctcgccctggt
caacaagtcagggttctggggcaggagtatacggttgatgatgaagaagacatgcttgtt
gccacaataatagacacctttattgctgaatctcggtacaatatacctacaagcggcgtt
cctgctggaaactgggtgcttttaagtggaatcgacaattcaattgtcaaaacagctaca
ctagtcccgctccgcctggaggacgacgaggatgcgtatattttcaaaccaatccaccat
atgaccgaatccgtcttcaaagttgccgttgagcccatcaatccttccgaacttcctaag
atgctagaaggcctccgaaaagtcaacaagagctatccccttatctccacaaaagttgaa
gaatctggagagcacattgttcttggaaccggcgagctctatatggactgcgtactccac
gatctgcgccgactgtatgctgagatggagctcaaagtctcagatcctgttacgaggttt
tgtgaaacggtcgttgaaacttccgccataatgtgttatgccatgacacccaataagaaa
aataaaatcacaatggtcgctgaacctttggatgatggcatcgctgaggatatagaagct
ggccatgtccgtatccgagatccaacgaggaaggtagctaaattcttcgaggagaagtat
gactgggataagttggccgctcgaagtatctgggcatttggacctgacgacatggggcct
aatatactccaggacgacactctaccgtcgcaggttgataaaaagcagcttgcgacagta
agagactctatccgccaaggatttagctggggtacccgcgaaggcccgctgtgcgaagaa
cccatccgaaataccaaattccgcctcacagacatttcactcgctgaccaagccattttc
cgaggcggaggtcaaatcatcccgaccgcccgacgcgccatttattcctctttcctcatg
gcgtccccccgcctcatggaaccaatatatacctgctccatgatcggtccggctgactcg
gttgcgtccatttacactgtgctctcacggcggcgaggtcatgtcctcaccgatggacct
atcgccggcacgccgctgtattcagtccgcgggttaatacctgtgatcgactcgtttggc
tttgagacagatcttagaatacacacacaaggtcaggcaacggtatcattagtgtttgac
aagtggagcgtcgttcctggtgatccgttggatagggaggtgaagttgcggcctctagag
atggccagcgccatggcgacggcgagggatttcgttctcaaaacaagaagacggaaaggg
ttggcagaggacgttactgtgagtaaattcttagaaccggagctgtggaagggattgaag
gagagcggaattcttggagaagggtag
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