Uncinocarpus reesii: UREG_03965
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Entry
UREG_03965 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ure
Uncinocarpus reesii
Pathway
ure03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UREG_03965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_03965
Enzymes [BR:
ure01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
UREG_03965
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
UREG_03965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
8444747
NCBI-ProteinID:
XP_002544448
UniProt:
C4JMA7
LinkDB
All DBs
AA seq
638 aa
AA seq
DB search
MGFKFSYVCDLLSNLDRNRIAKAASEAKTRDPDVATVIKWFDHHERKIHSTETDSLALLS
CLFPERRPERVFSLREPSLVKVIGRCLLLGASRKRELDRWGEKGWGDLGQCLEYVMQQAE
NHLEGQDEVTVEEIDLALAKVASRSRFSGPTVRYQHSAVDVDDTLSPIFRRLSSRDAKWF
TRLILKDFNPVIIPGQLILRNFHFLLPKLLLFQNSLEGALKFLAQEPISEFPPRPEAQYA
NLLGRVALPLLKPKVGVKVGRADFYKARSLKHCCQMVGGRVMSVERKYDGEYCQIHIDLS
KADCIQIFSKSGKDSTVDKRGVHDTLKESLRIGRSDCRFSNQCIVECEILVWSDHSSKIL
PFHKLRNHISRSGSFIGIENDSPPDPFEHLYLAFFDVLMVDGNVCLSKPYRERRQILLDI
VQPIEGRSELAYQQTINFSFPESYELLKDAVALGAAQRWEGLVLKGSDEPYLPLFQESAN
INFGHWIKLKKEYIPGLGDSADFALIGARYDPQDAVQCQNIKDLSWTSFFVGCLEGDGHI
SNTKSNRYRITDVLNRHNVSPTIMRTLNQLGQFRVCDNSSSPCSFSIKVDQPHMPEIEVF
FRTPFVVELVGSGFERPAGRAAKTKLYQRRENKGKPRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggctttaagttctcttatgtctgtgacctgctttcaaacttggatagaaaccgcatc
gccaaagcagcttcagaggcaaaaacgagggacccagatgttgctaccgtgatcaaatgg
ttcgaccaccatgagaggaagatacactctacagaaaccgacagtcttgcgctcttgtcc
tgccttttcccggagagacgccccgaacgtgtgtttagccttcgagaaccgtccctggtg
aaggttattggccgttgcctcctccttggtgcctcgagaaagcgtgaacttgatcgatgg
ggggaaaaggggtggggggatttaggtcagtgtctggagtatgtgatgcagcaggccgaa
aatcacctcgaaggccaagatgaggtcactgtggaagaaatagatcttgctttggccaag
gtcgcatctagatctcggttttcggggccaacggttcgctatcagcactctgctgtagat
gtcgatgatacgctatccccaattttccgcaggctatctagccgtgatgccaaatggttt
accaggctaatcctcaaggatttcaatcctgttatcatcccaggccaattaatccttcgg
aattttcactttctcttgccgaaactactccttttccaaaattcgctagagggagctttg
aaatttctggctcaagagccgataagcgaatttcctcctcgtcctgaagcccagtacgcg
aatcttttggggagagtcgccttacctcttctcaagcccaaggttggtgttaaagtcggc
cgagctgacttctataaagccagaagtctgaaacattgctgtcaaatggtaggcgggcgg
gtgatgagcgttgagaggaagtatgatggtgaatattgccaaatacacatcgatctttca
aaggcagactgtatacaaatattttcgaaaagcgggaaggattccacggtcgataagcgg
ggcgtccacgatacgcttaaagaatctctgaggattggcagaagcgactgtcgtttctcg
aatcaatgcatcgtggagtgtgagatccttgtgtggagtgatcacagctccaagatcctt
ccatttcacaaacttcgcaatcatatctctcgttccggctcttttatcggaattgagaat
gattctccacctgacccgttcgaacacttgtatctagctttttttgacgttctgatggta
gatggcaatgtctgtttgtcaaagccctaccgtgaacgtcgtcagattctccttgacatt
gttcaaccaattgaagggcgctcagagctagcttaccaacaaactatcaacttttctttc
ccagagagctatgagctgctaaaagatgccgtcgccctgggggccgcccagagatgggaa
ggccttgtcctcaagggaagcgatgagccatatctacctctttttcaagagagcgcaaat
atcaattttggacactggattaaactcaagaaagaatatatcccaggccttggtgattcc
gccgattttgcccttatcggcgcgagatatgacccccaagatgccgtccaatgccagaat
atcaaagatctttcgtggacgtcttttttcgttgggtgcttggaaggagacggacatatt
tcgaacacaaagtcaaataggtatcgaatcacagacgtgctcaatcgccataatgttagc
ccgacgattatgcggactctgaatcagctagggcagttccgagtttgtgataatagctcg
agcccgtgctccttctcgattaaagtagatcagcctcacatgccagagatagaagtcttc
tttcgaaccccgtttgtcgtggaactggttggaagtggtttcgaacggcccgcgggtcgt
gccgctaaaacgaagctttaccaacggagagaaaacaaaggaaagccccggggataa
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