Usitatibacter rugosus: DSM104443_03840
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Entry
DSM104443_03840 CDS
T06990
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00270
Cysteine and methionine metabolism
uru00450
Selenocompound metabolism
uru00670
One carbon pool by folate
uru01100
Metabolic pathways
uru01110
Biosynthesis of secondary metabolites
uru01230
Biosynthesis of amino acids
uru04980
Cobalamin transport and metabolism
uru04981
Folate transport and metabolism
Module
uru_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DSM104443_03840 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DSM104443_03840 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSM104443_03840 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSM104443_03840 (metH)
04980 Cobalamin transport and metabolism
DSM104443_03840 (metH)
Enzymes [BR:
uru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
DSM104443_03840 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
DUF3375
Motif
Other DBs
NCBI-ProteinID:
QJR12747
UniProt:
A0A6M4H4A8
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All DBs
Position
4072168..4075875
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AA seq
1235 aa
AA seq
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MDQTISPRPARLQALTDALAQRILVLDGAMGTMIQRHSLTEEQYRGERFKAHAKDLRGNN
DLLTLTQPGVIREIHEQYLEAGADILETNTFNSTSISQADYGLESIVRDLNLEGARLARS
VADGFTAKTPKKPRFVAGVLGPMNRTLSLSPDVNDPGYRAVTFDQVKDAYREATIALVEG
GVDLILVETIFDTLNCKAALFAVDEYFAETGTRLPIMISGTITDASGRTLSGQTPEAFWN
SVRHAKPLSVGFNCALGAKQLRPHIEELARIADVFVSAHPNAGLPNAMAEYDELPTETAG
YIKEWAQAGWLNITGGCCGTTPDHIKAIVETVSAFPPRVIPKIEPKLRLAGLEPLNVGHD
SLFVNVGERTNVTGSKAFARLILAGDYAEALTVARQQVENGAQVIDVNMDEAMLDSQAAM
AKFLNLVQAEPDICRVPVMIDSSKWSVIEAGLKCVQGKCIVNSISMKEGEAEFIKHATLA
RRYGAAVIVMAFDEKGQADTLERKISICQRSYKLLTEQVGIPPEDIIFDANIFAIATGIE
EHNRYAIDYLEALAWIHRHLPHASTSGGVSNLSFSFRGNEPVREAMHTAFLYHAAKAGMT
MGIVNAGQLGVYAEIPKDLLEHVEDVLFDRRKDSTERLVEFAETFKGQKKDAAQELEWRS
APVKERLVHSLVKGITQYIVEDTEEARQQFERPIQVIEGPLMDGMNVVGDLFGSGKMFLP
QVVKSARVMKQAVAHLVPFIEEEKKRLGTADAKAKGKVVMATVKGDVHDIGKNIVGVVLQ
CNNYEVVDLGVMVPAQKILDTAIETNADMIGLSGLITPSLEEMAHFAKEMERLGFKMPLL
IGGATTSRTHTAVKIEPHYSGPTVWVPDASRAVGVASSLLSTEGGRDGYVQSVRDDYVKV
REAHANKTGQKSVAIAAARANAIKIDWAAHMPPKPRSLGVMALKNYPLEKLVPFIDWAPF
FQAWDLAGKYPAILKDEVVGEAASNLHRDGLAMLDRVVKGRWLTASGVFGLWPANAVGDD
IEVYTDETRSHTLMTWHNLRQQNEKPSGNPNQCLADFVAPKDSGVADYVGGFAVTAGIGI
DAKVKEFEKKNDDYSAIMLKAIADRLAEAFAEHLHHLVRTTFWGYAEGENLPNEDLVAEK
YAGIRPAPGYPACPDHTEKGELFRVLSAEKNAGMELTDAYAMLPTAAVAGFYLSHPESRY
FAVGKIERDQVADYAHRKGMDLSAMERWLAPNLNY
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaccagacgatttccccccgccctgcccgcctccaggcgctgacggacgcgctcgcc
cagcgcatcctcgtgctggacggcgccatgggcaccatgatccagcgccactcgctgacc
gaggagcagtaccgcggcgagcgcttcaaggcgcacgcgaaggacctgcgcggcaacaac
gacctcctcacgctcacgcagcccggggtgatccgcgagatccacgagcaatacctcgag
gccggcgccgacatcctcgagaccaacaccttcaactcgacgtcgatctcgcaggccgac
tacggcctcgagtccatcgtccgcgacctgaacctcgaaggcgcgcgcctcgcccgctcc
gtggcggacgggttcacggcgaagacgccgaagaaaccgcgcttcgtcgccggcgtgctg
ggcccgatgaaccgcacgctctccctctcgcccgacgtgaacgatccgggctaccgggcc
gtgaccttcgaccaggtgaaggacgcctaccgcgaagcgacgatcgccctcgtcgaaggc
ggcgtggacctgatcctcgtcgagacgatcttcgacacgctgaactgcaaggcggcgctc
ttcgcggtcgacgagtacttcgccgagacgggcacgcggctaccgatcatgatctccggc
acgatcaccgatgcatccggccgcacgctctcgggccagacgccggaggccttctggaat
tccgtgcgccacgcgaagcccctgtccgtcggcttcaactgcgcgctgggcgccaagcag
ctgcgcccgcacatcgaggagctcgcgcgcatcgcggatgtattcgtctccgcgcatccg
aacgcgggccttcccaatgcgatggcggagtacgacgagctcccgaccgagaccgcgggc
tacatcaaggaatgggcgcaagcgggctggctcaacatcaccggcggctgctgcggcacc
acacccgatcacatcaaggccatcgtggagacggtctccgccttcccgccgcgcgtgatc
ccgaagatcgagccgaagctgcgcctcgcgggcctcgagcccctcaacgtcggccacgac
tcgctcttcgtgaacgtgggcgagcgcaccaacgtcacgggctccaaggccttcgcgcgc
ctgatcctcgccggcgactatgccgaagccctcacggtcgcccgccagcaggtggagaac
ggcgcgcaggtgatcgacgtgaacatggacgaggcgatgctcgactcgcaggcggccatg
gcgaagttcctgaacctcgtccaggcggaaccggacatctgccgcgtgccggtcatgatc
gacagctcgaagtggagcgtgatcgaggcggggctcaagtgcgtgcagggcaagtgcatc
gtgaactcgatctcgatgaaggaaggcgaggcggaattcatcaagcacgcgacgctcgcc
cggcgctacggcgcggcggtcatcgtgatggccttcgacgagaagggccaggcggatacg
ctcgagcgcaagatctccatctgccagcgcagctacaagctcctcaccgagcaggtcggc
atcccgcccgaagacatcatcttcgatgcgaacatcttcgcgatcgccaccggcatcgag
gaacacaaccgctacgccatcgactacctcgaggcgctggcgtggatccatcgtcacctg
ccgcacgcgagcacctcgggcggcgtctcgaacctctccttctccttccgcggcaacgaa
ccggtgcgcgaagcgatgcacacggcgttcctctatcacgcggccaaagccggcatgacg
atgggcatcgtcaacgcgggccagctcggcgtgtacgcggagatcccgaaggacctgctc
gagcacgtcgaggacgtcctcttcgaccgccgcaaggattcgacggagcgcctggtcgaa
ttcgccgagaccttcaagggccagaagaaggacgccgcccaggagctcgagtggcgcagc
gctccggtgaaggagcgcctggtccactcgctcgtgaagggcatcacgcaatacatcgtc
gaggacacggaagaggcccgccagcaattcgagcgcccgatccaggtgatcgagggcccg
ctcatggacggcatgaacgtcgtgggcgacctcttcggctccgggaagatgttcctcccg
caggtcgtgaagagtgcccgcgtgatgaagcaggccgtcgcccacctcgtgcctttcatc
gaggaagagaagaagcgcctaggcacggccgatgcgaaggccaagggcaaggtcgtgatg
gccaccgtcaagggcgacgtgcacgacatcggcaagaacatcgtgggcgtcgtgctccag
tgcaacaactacgaggtcgtcgatctcggcgtcatggtgccggcgcagaagatcctcgac
accgccatcgagaccaacgcggacatgatcgggctctcgggcctcatcacgccctcgctc
gaggagatggcccacttcgccaaggagatggagcgcctcgggttcaagatgccgctgctg
atcggcggggccaccacgtcgcgcacgcacacggcggtgaagatcgagccgcactactcc
ggccccacggtctgggtgccggacgcatcgcgagcggttggcgtggcttcgagcctgctc
tccaccgaaggcggacgcgacggctacgtacagtcggtgcgcgacgattacgtcaaagtg
cgcgaggcccacgccaacaagacgggccagaagtccgtcgcgatcgcggccgcgcgtgcc
aacgccatcaagatcgactgggccgcgcacatgccgcccaagccgcgcagcctcggcgtg
atggcgctcaagaactacccgctagagaagctcgtgcccttcatcgactgggcgccgttc
ttccaggcgtgggacctggccgggaagtatccggcgatcctcaaggacgaggtcgtagga
gaagccgcgagcaacctccatcgcgacggactcgcgatgctggaccgcgtcgtgaagggc
cgctggctcaccgcgagcggcgtcttcggcctgtggcccgcgaacgccgtgggtgacgac
atcgaggtctataccgacgagacgcgctcgcacacgctgatgacgtggcacaacctgcgc
cagcagaacgagaagccttcgggcaacccgaaccagtgcctcgcggacttcgtcgccccc
aaggactcgggcgtcgcggactacgtgggcggcttcgcggtcaccgccggcatcggcatc
gacgcgaaggtgaaggagttcgagaagaagaacgacgactacagcgcgatcatgctgaag
gcgatcgccgaccgcctcgccgaagccttcgccgagcacctgcaccacctcgtgcgcacc
acgttctggggatatgccgaaggcgagaacctcccgaacgaggacctcgtcgccgagaag
tacgccggcatccgccccgcgcccggctatcccgcctgccccgaccatacggagaagggc
gagctcttccgcgtgctctcggcggagaagaacgccggcatggagctcacggacgcgtac
gccatgctgcccacggccgcggtggccggcttctacctttcgcatcccgagtcgcgctat
ttcgcggtggggaagatcgagcgcgaccaggtcgccgactacgcgcaccgcaagggcatg
gacctctcggcgatggaacgctggctcgcgccgaacctgaactactag
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