Variovorax sp. PAMC 28711: AX767_06940
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Entry
AX767_06940 CDS
T04325
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00300
Lysine biosynthesis
vaa00550
Peptidoglycan biosynthesis
vaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AX767_06940
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AX767_06940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
AX767_06940
Enzymes [BR:
vaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AX767_06940
Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
Precursor biosynthesis
Amino acid ligase
AX767_06940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AMM24113
UniProt:
A0A126ZAJ7
LinkDB
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Position
complement(1390342..1391853)
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AA seq
503 aa
AA seq
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MSQPLTTFSSPAEAAHWLRSCVGGALHADSRALESGDGFIAWPGAATDGRHHVASALAQG
AVACLVESEGVEAFGFDSDAIACYPGLKAATGEIAAWFYGKPSEQLDVLAITGTNGKTST
AWWLAEALSRSERIAQSPCGVIGTLGIGMPPALVSTGLTTPDPVMLQRELRAFVSRGFGA
CAIEASSIGIAERRLDGTRIAVAVFTNFTQDHLDYHGDMDAYWQAKAELFRWPGLRAAVV
NLDDVHGASLVGNLVESGVGSLDVWTVSAAGSPARLRATDIGYGVDGLEFSIVESSLPVE
RLATQLIGQYNVDNLLGVVGTMRALGIPLAAAVAACRHLSSVPGRMERVSVSGQPLAVID
YAHTPDALDKALAGLRPLARQRGGALWCVFGCGGDRDAVKRPLMAAVAEKRADRLVITSD
NPRSEKPAAIVSQILLGLAAPDAAQVEVDRARAIADTLAQAAPEDVVLIAGRGHEAWQES
AGERIAFSDRAHAIDALTRRSAA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccactcaccaccttttcctcgccggccgaagccgcgcactggctgcgttcg
tgcgtcggcggcgcgctgcacgccgacagccgggccctcgaatcgggcgacggtttcatc
gcctggccgggcgccgcgaccgatggtcgccaccacgtcgcatcggcactggcgcaaggc
gcggtggcctgcctggtcgagagcgaaggcgtggaggccttcggcttcgacagcgacgcg
atcgcctgctatcccggactcaaggccgcgaccggcgagatcgccgcgtggttctacggc
aagccgtcggagcagctcgatgtgctcgccatcaccggcaccaacggcaagacgtccacc
gcctggtggctcgccgaggcactctcccgatcggagcgcatcgcgcagtcgccgtgcggc
gtgatcggcacgctgggcatcggcatgccgccggcgctggtctccaccggcctcaccacg
cccgacccggtgatgctgcagcgcgaactgcgcgccttcgtgtcgcgcgggttcggcgcc
tgcgcgatcgaggcctcgtccatcggcatcgccgagcggcggctcgacggcacgcgcatc
gcggtggccgtgttcaccaatttcacgcaggaccacctcgactaccacggcgacatggat
gcctactggcaggccaaggcggaactgttccgctggcccggtctgcgcgcggcggtggtc
aacctcgacgacgtgcacggcgcctcgctggtcggcaacctggtcgaatccggcgtgggt
tcgctcgatgtgtggaccgtgtcggcggccggttcgccggcgcgcctgagggccacggac
atcggctacggcgtcgacgggctcgagttttcgatcgtcgagagcagcctgccggtcgag
cgtctcgcgacgcagctgatcggccagtacaacgtcgacaatctgctcggcgtcgtgggc
acgatgcgcgcgctcggcatcccgctcgccgccgccgtggccgcctgccggcacctgagc
agcgtgccgggccgcatggagcgcgtgagcgtttcggggcagccgctggccgtgatcgac
tacgcccacacgcccgatgcgctcgacaaggcgctggccgggctgcggccgctggcccgg
caacgcggcggcgccctctggtgcgtgttcggttgcggcggcgatcgggacgccgtcaag
cgcccgctgatggcggccgtggccgagaagcgggccgatcggctcgtcatcaccagcgac
aacccgcgcagcgaaaagccggcagccatcgtcagtcagatcctgctcggcctcgccgct
cccgatgcggcgcaggtcgaggtcgaccgtgctcgcgcgatcgccgacacactggcccag
gcggcccccgaagacgtggtgctgatcgccggtcgtggccacgaagcgtggcaggaaagt
gccggcgaacgcatcgccttttccgatcgcgcgcatgcaatcgacgcgctcacgcgccgg
agtgccgcatga
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