Vagococcus xieshaowenii: E4Z98_04875
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Entry
E4Z98_04875 CDS
T05932
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4Z98_04875 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_04875 (nth)
Enzymes [BR:
vac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E4Z98_04875 (nth)
DNA repair and recombination proteins [BR:
vac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E4Z98_04875 (nth)
Prokaryotic type
E4Z98_04875 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
HHH_8
RecR_HhH
DUF4294
Motif
Other DBs
NCBI-ProteinID:
QCA28682
LinkDB
All DBs
Position
1010078..1010716
Genome browser
AA seq
212 aa
AA seq
DB search
MLSKAKTMEAIDIIADMYPDAECELVHKNPFELLIAVILSAQTTDVSVNKVTPALFNKFP
TPEALATADLTDIEDTIKTIGLYRNKAKHIKGCSQKIVSEFDGKVPQTIKELVSLPGVGK
KTANVVVSTAFGVPAIAVDTHVERVSKRLRIVKQSATVNEVEETLMKKIPKDRWSKTHHQ
LIFFGRYHCTARKPKCSECPLLYMCAEGQKNT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctaaagcaaaaacaatggaagccatcgatattattgccgatatgtatccagat
gccgaatgcgaattagttcataaaaatccatttgaacttttaatcgctgttattcttagc
gcacaaacaacagatgtttcagttaataaagtaacacctgctttatttaataaatttcca
actcctgaagctctagcaacagctgatttaacagatattgaagacacaattaaaacaatt
gggttatatcgaaacaaagccaaacatattaaaggttgtagtcaaaaaatagtctctgag
tttgatggtaaggtaccacagactataaaagagctcgttagtttaccaggcgttgggaaa
aaaacggcaaatgttgtggtaagtacagcttttggcgttcctgctattgcagtggatact
cacgttgaaagagtctccaaacgtttaagaattgtgaaacaatcggctactgttaatgaa
gtagaagagacattaatgaagaaaatacccaaagatagatggtctaaaacacatcatcaa
ttaattttcttcgggcgctatcactgtacagcaagaaaaccaaaatgtagtgaatgtcca
ttgctttatatgtgtgcagaaggtcaaaaaaacacataa
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