Variovorax sp. EBFNA2: RZE79_04235
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Entry
RZE79_04235 CDS
T10564
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00540
Lipopolysaccharide biosynthesis
vae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RZE79_04235 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vae01005
]
RZE79_04235 (lpxC)
Enzymes [BR:
vae01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RZE79_04235 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vae01005
]
Lipid A
RZE79_04235 (lpxC)
SSDB
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Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WPG38547
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All DBs
Position
946274..947197
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AA seq
307 aa
AA seq
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MLQQRTLKSISRAVGVGLHSGQRVELTLRPAPADTGIVFRRVDLPEPVEIRMTAESVTDT
RLASTVSTGGAKVQTVEHIMSACAGLGIDNLYIDITADEVPILDGSASSFVFLLQSAGIE
LQKAPRRFIRVLRKVEVREGEGANEKWASLEPYHGFKLSFEIDFDHRVVNSTGQRVEFDL
GTDSYSRDIARARTFGFTKEVEYMRSKGLALGGGLDNAIVMDDTKVLNAGGLRYDDEFVK
HKILDAMGDLYIIGKPLLAAYTAFRSGHALNNKLLRELLSHSDAYEVVTFEDEKRAPRGF
GEVARAW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcaacaacgaaccctcaagtcgatcagccgcgccgtgggcgtggggctacacagc
ggccaacgcgtggagctgaccctgcgaccggccccggccgacacgggcatcgtgttccgc
cgcgtcgacctgcccgagccggtcgagatccgcatgaccgccgaatcggtcaccgacacg
cgcctggcgtccaccgtgtccacgggcggcgccaaggtgcaaacggtcgaacacatcatg
tccgcctgcgcgggcctgggcatcgacaacctttatatcgacatcacggccgacgaagtg
ccgatcctcgacgggtcggcctcgtccttcgtgttcctgctgcaaagcgcgggcatcgaa
ctgcagaaggcgccgcgccgcttcatccgcgtgctgcgcaaggtcgaggtgcgcgaaggc
gagggcgccaacgagaagtgggcgagcctggagccgtaccacggcttcaagctgagcttc
gagatcgacttcgaccaccgcgtcgtcaactccaccggccagcgcgtggagttcgacctg
ggcaccgactcgtacagccgcgacatcgcacgcgcgcgcaccttcggcttcaccaaagag
gtcgagtacatgcgcagcaagggcctggcgctcggcggcggcctcgacaacgccatcgtc
atggacgacaccaaggtgctcaatgccggtggcctgcgctacgacgacgagttcgtgaag
cacaagatcctcgacgcgatgggcgacctgtacatcatcggcaagccgctgctggccgcg
tacaccgcgttccgctcgggccatgcgctcaacaacaagctgctgcgcgagctgctctcg
cacagcgacgcctacgaggtcgtgaccttcgaagacgagaagcgcgcgccgcgcggcttc
ggcgaagtggcgcgggcctggtaa
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