Variovorax sp. EBFNA2: RZE79_13630
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Entry
RZE79_13630 CDS
T10564
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vae Variovorax sp. EBFNA2
Pathway
vae01501
beta-Lactam resistance
vae01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RZE79_13630
01503 Cationic antimicrobial peptide (CAMP) resistance
RZE79_13630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vae03036
]
RZE79_13630
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_13630
01504 Antimicrobial resistance genes [BR:
vae01504
]
RZE79_13630
Chromosome and associated proteins [BR:
vae03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RZE79_13630
Transporters [BR:
vae02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RZE79_13630
Antimicrobial resistance genes [BR:
vae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RZE79_13630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_RND
Biotin_lipoyl
RND-MFP_C
BSH_Fcp1
CzcB_C
BSH_YknX
BSH_CusB
BSH_CzcB
BSH_LcnD
HH_YBHG
Peptidase_M23
NQRA_N
HH_MFP_RND
TFIIA
Motif
Other DBs
NCBI-ProteinID:
WPG40343
LinkDB
All DBs
Position
complement(2919218..2920402)
Genome browser
AA seq
394 aa
AA seq
DB search
MKTMKRSTLFIALLALIVVVAAGLWLTRKPADDKAASAAKTPAQRPALTVSVAKPEATEL
TVTLAANGNVAAWQEAVIGSESNGLKLAEVRVNVGDTVKKGQVLAVFSPETVQADIAQAR
ASLAEARASAADAAGNAARARTLQATGALSQQQINQYQTTEQTAKARAEAAEAVLAAQQV
RGRNTQVLAPDDGVISARTATVGSVVGAGTELFRLIRQGRLEWRAEVTSAELGRIAVGTP
VFVVSASGAQVKGKVRSIAPTVDPQTRAALVYVDLPNVQQNTGVKAGMFARGDFELGRSS
APTVPQSAIVPRDGFNNVFTLLPDGRVAQLKVQTGRRLKDRVEITSALPEGVQIVVQGAG
FLNDGDLVRVVDATPTAVAPATPAKAAASAPSPK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgaagcgttccaccctgttcatcgcgctgctggcgctgatcgtcgtcgtt
gccgcaggcctgtggctcacgcgcaagccggccgacgacaaggccgcatcggccgccaag
accccggcccagcgccccgcgctgacggtctcggtcgccaaacccgaggccaccgagctg
accgtcacgctggccgccaacggcaacgtggcagcctggcaggaggccgtgatcggctcc
gaatcgaacggcctgaagctggccgaggtgcgcgtcaacgtgggcgacaccgtgaagaag
ggccaggtgctcgcagtgttctcgcccgagacggtgcaggccgacatcgcgcaggcacgc
gcttcgctcgccgaagcccgcgcctcggccgccgacgcggccggcaacgccgcgcgcgcc
cgcacgctgcaggccacgggcgcgctgagccagcagcagatcaaccagtaccagaccacc
gagcagaccgccaaggcgcgcgccgaagcggccgaggccgtgctggccgcgcagcaggtg
cgcggtcgcaacacgcaggtgctggcaccggacgacggcgtgatctccgcgcgcaccgcc
acggtcggcagcgtggtcggtgccggcaccgagctgttccgcctgatccgccagggccgg
ctcgaatggcgcgccgaagtcacctcggccgaactcggccgcatcgccgtgggcacgccg
gtctttgtggtcagcgccagcggcgcgcaggtcaagggcaaggtgcgcagcatcgcgccc
acggtcgatccgcagacgcgcgcggcgctggtctacgtcgacctgcccaacgtgcagcag
aacaccggcgtgaaggccggcatgttcgcgcgcggcgacttcgaactcggccgcagttcc
gcgccgaccgtgccgcaaagcgccatcgtgccgcgcgacggcttcaacaacgtcttcacg
ctgctgcccgacggccgcgtggcgcagctcaaggtgcagaccggccgccgcctgaaggac
cgcgtggaaatcaccagcgccctgcccgagggcgtgcagatcgtggtgcagggcgcgggc
ttcctcaacgacggcgacctggtgcgcgtggtggacgccacgcccaccgccgtggcacct
gccaccccggcgaaggcagcggcatccgcgccttcgcctaaataa
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