KEGG   Verticillium alfalfae: VDBG_00596
Entry
VDBG_00596        CDS       T02227                                 
Name
(RefSeq) DNA base excision repair N-glycosylase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
val  Verticillium alfalfae
Pathway
val03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VDBG_00596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_00596
Enzymes [BR:val01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VDBG_00596
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VDBG_00596
 Prokaryotic type
     VDBG_00596
SSDB
Motif
Pfam: HHH HhH-GPD HHH_5 RecR_HhH
Other DBs
NCBI-GeneID: 9534050
NCBI-ProteinID: XP_003008914
UniProt: C9S6J7
LinkDB
AA seq 317 aa
MAWKRTPENAAAWVTKVEPMIKAPPFPPTPNPLPSHRESAGSRLASSKASRPRETRSRAR
QTGKRCTSLFVRCVSCGSPRVTPPSTPWGCERLFSPTASDRDRRFQILISLMMSSQTKDT
VNAVAMGRLHDELPPHEAGAPPGLNLENILAVEPAKLNELIRVQEALLLRDNFDADIPPT
IDGLTSLPGVGPKMAHLCLSAAWGRTEGIGVDVHVHRITNMWGVAQRQRAPRPRASPLEA
WLPRDRWHEINTLLVGLRPEPGARPQAGRRRLRASATFGLARPGAGAERPGFLTGFANGG
PDGRGSASVVAMSSVMR
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcctggaaacgaacccccgaaaacgccgccgcgtgggtcacaaaggttgagcccatg
atcaaggcaccgccctttcccccgactccaaacccccttccgagtcaccgcgaaagcgcc
ggaagccggctcgcgtcatcaaaggcgagtcgccctcgggagacacggtcgagggcccgt
cagactgggaagagatgtacgagcttgttcgtcagatgcgtctcctgcgggtccccgcgc
gtgacgccgccgtcgacaccatggggctgcgagcgcctcttctcgccaacggccagcgac
cgcgaccgccgcttccagatcctcatctccctgatgatgtcgagccagacaaaagacacc
gtcaatgcggtggccatgggccgactgcacgatgagttgccaccccatgaagcgggcgcg
ccaccagggttgaacctcgagaacatattggccgtcgagcctgcgaagctcaacgagctc
atcagagtccaggaagcgctcctcctccgcgacaacttcgacgccgacattcctccgacc
atcgacggcctcacctcgctccccggggtcggccccaagatggcccacctctgcctctcc
gccgcctggggccgcaccgagggcatcggcgtcgacgtccacgtgcaccgcatcaccaat
atgtggggggtggcacaaagacagcgagccccgaggcctcgcgcctcgcccctcgaggcc
tggctaccccgcgaccgctggcacgagatcaacacgctgctcgtcggccttcggccagaa
ccgggtgcccggccacaggccggcaggcggcggttgcgggcgagtgcgacctttgggctg
gcgcggcctggtgccggggcagagaggcctggtttcttgaccggctttgccaatggcggc
ccggatgggcgggggtcagcgagtgttgtcgccatgtcgtccgtcatgcgatga

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