Verticillium alfalfae: VDBG_02620
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Entry
VDBG_02620 CDS
T02227
Name
(RefSeq) protein tyrosine phosphatase
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
val
Verticillium alfalfae
Pathway
val00062
Fatty acid elongation
val01040
Biosynthesis of unsaturated fatty acids
val01100
Metabolic pathways
val01110
Biosynthesis of secondary metabolites
val01212
Fatty acid metabolism
Module
val_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
VDBG_02620
01040 Biosynthesis of unsaturated fatty acids
VDBG_02620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
val01004
]
VDBG_02620
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
VDBG_02620
Lipid biosynthesis proteins [BR:
val01004
]
Fatty acid synthase
Component type
VDBG_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
9535695
NCBI-ProteinID:
XP_003006481
UniProt:
C9SEB8
LinkDB
All DBs
AA seq
225 aa
AA seq
DB search
MADPAAAPAKPQRKSSPVKNAYLILYNALSAIAWLVVLGRTVALFYLRGPDFVHLGVGDW
TRWTQTMAGMEVLHALLGVVRSPVPTTLMQVLSRYLLVWGVVWPFPWLARSPFYTSMLLA
WSVTEVIRYSYFALTLSGLQPKALVWLRYNTFFLLYPIGIASECALIYLAAEPAKAYGEL
VPYLSYAILAIYVPGSYILYTYMMKQRRKVMRSLKAEQVGSAKTQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagcagcagccccggcaaagccgcagcgcaaatcctcgcccgtcaagaat
gcctacctaatcctctacaacgccctctcggccatcgcctggctcgtcgtgctcggccgc
actgttgcgctcttctacctccgcgggcccgactttgtccacctcggcgtcggcgactgg
acacgatggacccagaccatggccggcatggaagtcctgcacgccctcctcggcgtcgtc
cgctcacccgtcccgacaaccctcatgcaggtcctgagccgctacctcctcgtctggggc
gtcgtctggcccttcccctggctcgcccgcagccccttttacacctcgatgctcctcgcc
tggagcgtcaccgaggtcatccgctactcctactttgccctgaccctgagcggcctgcag
cccaaggccctcgtctggctgcgctacaacacctttttcctgctctaccccatcggcatc
gccagcgagtgcgccctcatctaccttgccgccgagcccgccaaggcctacggcgagctc
gtgccgtatctgagctacgccatcctggccatctacgtccctggttcctatattctgtac
acgtacatgatgaagcagaggagaaaggtcatgcgcagcttgaaggctgagcaggtcggg
tctgccaagacccagtag
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