Verticillium alfalfae: VDBG_04033
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Entry
VDBG_04033 CDS
T02227
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_04033
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
VDBG_04033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
AAA_34
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
9532695
NCBI-ProteinID:
XP_003006080
UniProt:
C9SFD8
LinkDB
All DBs
AA seq
983 aa
AA seq
DB search
MAPRKARTSAAHSLASRPETPESSRSRRMTRSTSTQKLSSAVSLPPVDAIEPLSVVVRGS
KSTTSASTSATFTSASEASTPATSHEVTPAPPAADEKSASTRPMMSRLEVQIPVMERAPS
ERATRNTRFSLARASKRSSNAYEVLDSDEDELAFDTPPDEIIARRLQKEEYEKMDMPDLV
STSRPVRGLRASLERTPVAKGKRGRPSKSPLSASIERPTKKQKLITDSEDDALSDDANGQ
ASSSDLSEALSIKTESDDFEAPEETGEDDSSDDMVEVARPRPGTLPKKRRPTRPNAPQGF
RSAATLPLLPSSEPDDDDFDPDQSDEELPELADASARISLDDSHDFVLGRRARRERDRLE
RHHPELDTMWTDLEARPAMSGAEAVQPTNITRQLKPFQLKGVAWMKEMEMTDWKGGLLGD
EMGLGKTLQSVSLIMSDHGLIKKPSLVLVPPVALMQWTNEIASYTDGTLKTFVFHGTNTK
VKNVTAKELKRFDVIMMSYNSLESMFRKQEKGFNQRKKGEVHKQKSIIHQIDFHRIILDE
AHYIKGRDTGTARACIALKGDYRWCLTGTPLQNRIGELFSLVRFLNITPFASYLCKQCKC
SQLEWNMDEHKMCNSCGHSAIQHVSVFNQEILNPIIKYGAMGPGAIAFKKLRLITSKFML
RRLKKDHMSAMDLPVKEININREFFSEVENDFARSIMTNTQRQFDTYVARGVMLNQYANI
FGLLMQMRQIADHPDLILKKNAEGGQNIMVCCICDEPAEDAIRNMDELSCPMCHIPLSID
LEQPEIEQDQAMVKKSSIINRIKMEEWTSSSKIETLVYELHKLRSDKATHKSIVFSNFTS
MLQLIEWRLRRAGVTTVMLDGSMTPAQRQASIDHFMKNPEVECFLVSMKAGGVALNLTEA
SHVFIVDPWWNPAAEWQSADRCHRIGQGRPCTITRLCIEDSVESRIVQLQEKKTNMIHST
VNGDDKAMKSLSPEDMQFLFRGS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcaaagcccgcacctcagccgcgcactctcttgcgtccaggcctgagacc
cctgagagtagtcgctctcgccgaatgaccaggtctacctcgacccaaaagctgagctct
gcagtttctctgccgcctgtggacgctatcgaacccttgagtgtggtcgtgagaggcagc
aaatcgacaacgtcggcctcgacctcggccaccttcacctcagcaagcgaggcttctact
ccggctacgagccacgaggtcacgccagcgccaccggctgctgacgagaagtcggcatca
actcgacccatgatgagtcgtctggaggtgcaaattccagtcatggaaagagcccctagt
gagagggccactagaaacacccggttttcactcgctcgcgcctcgaagcgcagtagcaac
gcgtatgaagttctcgacagtgacgaggacgagttggcttttgacactcctcccgacgaa
atcattgctcggcgtctacaaaaagaagagtatgaaaagatggatatgccagatctcgtg
tctacgagccgtccagtccgtggtctgcgagcttctttggaaagaacccctgtagccaag
ggcaaacgcggcagaccatcaaagtctccactctcggcaagcatcgaacgacccacgaag
aagcagaagctcatcactgactccgaagacgatgccctctctgatgacgccaatggtcaa
gcttcgtcttcagaccttagcgaggccttgagcatcaagacagaatcggatgattttgaa
gcccccgaggagacgggcgaggacgacagcagcgatgatatggttgaagttgcgcggcca
cgtcccggaacactgcctaagaagaggcgtccaactcggcccaatgctcctcaaggcttc
agatcggctgccacattgccactccttccttcttcggagcctgatgatgatgatttcgac
ccagatcagtcggacgaggagctccccgagcttgctgatgctagcgctcggataagtctt
gacgactcgcatgactttgtgctcggccgccgtgcccgccgagagcgggaccgacttgag
agacaccacccggaactcgacacgatgtggacagacttggaagcacggcccgccatgtcc
ggtgctgaggcggttcagcccaccaatattacacgacagctcaagccttttcagctgaag
ggtgttgcttggatgaaagagatggagatgactgattggaagggtggccttctgggtgat
gagatgggcttgggcaagaccctacagagcgtctccctcatcatgtccgaccacggcttg
atcaagaagccttccctcgttttagtcccgcctgttgccctaatgcaatggaccaacgag
attgcctcgtacacagacggaaccctgaagacgttcgttttccatggcaccaatacaaag
gtcaagaatgtcacagccaaggagctcaaaaggttcgatgtcatcatgatgtcgtacaat
agtttggagtccatgtttcgcaagcaggaaaaggggttcaaccagcgcaagaagggcgag
gtccacaagcagaagagcataatccaccagatcgacttccaccgaattattctcgacgag
gcacactacatcaagggccgcgacacgggcactgccagggcatgcatcgccttgaaaggc
gactacagatggtgtctgacaggcacgcctctccagaaccgaatcggagagctgttctca
cttgtgcgcttcctcaacattacaccattcgcctcgtatctttgcaagcagtgcaagtgc
agccaactcgagtggaacatggacgagcacaagatgtgcaacagttgcggacattctgcc
attcagcacgtgtccgtgttcaatcaggagattttgaaccccatcattaaatacggtgcc
atgggtcccggtgccatcgccttcaaaaagctgcgactgataactagcaagttcatgctt
cgccgcttgaagaaggaccacatgagtgccatggacctgcccgtcaaagagatcaatatc
aaccgggaattcttcagcgaggtggagaatgactttgcgcgcagcatcatgaccaacacg
caacgccagttcgacacgtatgtggctcgtggcgtcatgctgaaccagtatgccaacatt
ttcggtctactcatgcaaatgcgccagattgccgatcatcctgacttgatcctgaagaag
aatgccgagggcggtcagaacatcatggtctgctgcatttgcgacgaacccgctgaggat
gcgattcgcaacatggatgagctgtcgtgtcccatgtgccatataccgctgtcgatcgac
ctggagcagcccgagattgagcaggaccaggccatggtaaagaagtcgtccatcatcaac
cgcatcaagatggaggagtggacttcgtcaagcaaaatcgagacgctcgtatacgagctg
cacaagctccggtctgacaaggccacgcacaagtcgattgtgttttccaactttacgtcg
atgcttcagctcatcgagtggcgtctccgccgcgccggcgtcaccactgtcatgctcgat
ggttcgatgacgccagcacaacgacaagcatctatcgaccatttcatgaagaacccagaa
gtcgagtgctttctagtttccatgaaggcgggcggtgtggctctcaacctgactgaggca
tctcacgtctttatcgtggacccctggtggaaccctgcggccgagtggcagtctgcggat
cgctgccatcgtatcggacagggccgtccctgtaccattacccgtctttgcatcgaggac
tcggtagagagccgtattgttcagctccaagagaagaagacgaacatgattcactcgacc
gtcaatggggatgacaaggcgatgaagtcgctcagcccggaggacatgcagttccttttc
cgtggcagttag
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