KEGG   Verticillium alfalfae: VDBG_05022
Entry
VDBG_05022        CDS       T02227                                 
Name
(RefSeq) SMB
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
val  Verticillium alfalfae
Pathway
val03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDBG_05022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_05022
   03041 Spliceosome [BR:val03041]
    VDBG_05022
   03032 DNA replication proteins [BR:val03032]
    VDBG_05022
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     VDBG_05022
Spliceosome [BR:val03041]
 Complex A
  U1 snRNP components
   Sm proteins
    VDBG_05022
  U2 snRNP components
    VDBG_05022
 Complex B
  U1 snRNP components
    VDBG_05022
  U4/U6.U5 tri-snRNP components
    VDBG_05022
 Complex C
  U2 snRNP components
    VDBG_05022
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     VDBG_05022
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9532098
NCBI-ProteinID: XP_003005416
UniProt: C9SIZ0
LinkDB
AA seq 184 aa
MANKQGKMADLTRSLFRPATYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRV
KRKQNKPSAPGASGSGQTVESEEKRTLGLTIVRGAQIVSLSVESEPPADPSARLGKSATG
GIASTLSAGPGVARPAGRGAAVPPSLAGPAAGVGGGAGGAFPPQGFPPGPPGGGPPGFNP
PPRR
NT seq 555 nt   +upstreamnt  +downstreamnt
atggcgaacaaacaggggaagatggctgacttgacgcgatctctctttaggccggctacg
tatatcaactaccggatgagagtcactctgaacgacggtcgccagatgaccggtcagatg
cttgcgtttgacaagcacatgaacctcgtcctcgccgacacggaagagttccgacgcgtc
aagcgcaagcagaacaagccctccgcacctggcgcgagcggctctggccagactgtcgag
tcggaggagaaaaggaccttgggccttacgattgtccgaggcgctcagatcgtctcgctg
tcggtcgagtcggagcctcctgcggaccctagcgctcgcctgggcaagagcgcaactggc
ggcatcgcatctactctcagtgctggccctggtgttgcccgccctgctggtcgcggggct
gctgtgccgccatcattggcaggacctgctgctggtgttggtggtggcgcgggtggcgca
ttccctccccaaggcttccctcccggtcctcctggcggcggtcctcctggcttcaaccct
ccgcctcggaggtaa

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