Verticillium alfalfae: VDBG_07391
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Entry
VDBG_07391 CDS
T02227
Name
(RefSeq) G/U mismatch-specific uracil DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
val
Verticillium alfalfae
Pathway
val03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VDBG_07391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_07391
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
VDBG_07391
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VDBG_07391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
9527828
NCBI-ProteinID:
XP_003002820
UniProt:
C9SR06
LinkDB
All DBs
AA seq
320 aa
AA seq
DB search
MGAEDEGIKSEELTEDILEAKPASFHGRLQNFIHVPSSTDSPPRRSVRVAATLGQAGNLR
PEPRLRASPSPSPSRQTKRKASPSEGIKRKRSTPRYAPPSTYAHLPPLPDAIAPNLLILF
IGLNPGIQTASTGHAYAHPSNLFWKLLYHSGITSRLLPASEDRTLPERYACGFTNIVSRP
SRNGAELRNAELDAGVAVLEAKIAKWRPEAACIVGKGIWEAVFRVRKGRGMKKGKFEYGW
QEGENMGVVRDGEEGGPWEGARVFVATSTSGLAATLGPREKEVIWGELGAWCTQRRAERG
MLTEVKEEEAKSDGIELLDP
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgaagacgaagggatcaagagcgaggagctcacggaagacatccttgaagcc
aaacccgccagctttcatggccgcctacagaatttcatccacgtcccgtcatccacagac
tcaccaccccgccgcagcgttcgtgttgccgccactctcgggcaggcaggcaacttgagg
cctgagcccaggctacgggcatcaccatcaccatctccatcacggcagacgaaacgaaag
gcgtcgccttccgagggcataaaacggaagcggtccactcctcgttatgcgcctccctcc
acctatgcccatctgcccccgttgcctgacgccattgcacccaacctcttgatcctcttc
atcggcctcaacccgggcatccagactgcctcgacaggccatgcctacgcgcacccctcg
aacctcttctggaagcttctgtatcactcgggcatcacgtcgcgcctgctgccggcctcg
gaagaccggacgttgccagagcgatatgcgtgcgggttcactaacattgtgtcccgcccg
agccgcaacggcgccgagctacggaacgcggaacttgacgctggcgttgcggtgttggag
gctaagattgccaagtggaggccagaggcggcttgcatcgtgggcaagggcatctgggaa
gcagtcttccgggtcaggaagggcaggggcatgaagaaggggaagtttgagtacggctgg
caagagggcgagaacatgggggtggtgagggacggcgaggaaggggggccgtgggagggg
gccagagtgttcgtcgcgacgagcacgagcggacttgcggcgactctggggccgagggag
aaagaggtgatttggggggagcttggggcttggtgtacgcagaggagggccgagagaggc
atgctgactgaggtcaaggaggaagaagcgaagtctgatggcatcgagcttctagatcca
tga
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integrated database retrieval system
