Variovorax sp. PMC12: C4F17_11310
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Entry
C4F17_11310 CDS
T05380
Symbol
leuD
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00290
Valine, leucine and isoleucine biosynthesis
vam00660
C5-Branched dibasic acid metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01210
2-Oxocarboxylic acid metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
C4F17_11310 (leuD)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
C4F17_11310 (leuD)
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
C4F17_11310 (leuD)
4.2.1.35 (R)-2-methylmalate dehydratase
C4F17_11310 (leuD)
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AVQ81492
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All DBs
Position
1:2434314..2434970
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AA seq
218 aa
AA seq
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MQKFTVHKGLVAPMDRENVDTDAIIPKQFLKSIKKTGFGVNLFDEWRYLDPGLPGQDPAS
RKPNPDFVLNQPRYAGASVLLARKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNS
FKNGLLPIVLSEAQVGQLFDETFAFPGYTLTIDLERQVVVKPDGQEFAFDVQAFRKYCLI
NGLDDIGLTLRHKDKIKAFEAERLAQKPWLAHTMLANA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattcaccgtgcacaagggcctcgtggcgccgatggaccgcgagaacgtcgac
accgacgccatcattcccaagcagttcctcaagtcgatcaagaagaccggcttcggcgtg
aacctgttcgacgagtggcgctacctcgatccgggcctgcccggccaggatccggccagc
cgcaagccgaaccccgacttcgtgctcaaccagccgcgctacgcaggcgcctcggtgctg
ctggcgcgcaagaacttcggctgcggctcgtcgcgcgaacatgcgccgtgggcgctcgac
cagtacggcttccgcgcgatcatcgcgccgagctatgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgccgatcgtgctgtccgaagcacaggtgggccagctgttcgac
gagaccttcgccttccccggctatacgctgaccatcgacctggagcgccaggtggtggtg
aagcccgacggccaggagttcgcgttcgacgtgcaggccttccgcaagtactgcctgatc
aacgggctggacgacatcggcctcacgctgcgccacaaggacaagatcaaggccttcgag
gccgagcgcctggcgcagaagccctggctcgcgcatacgatgctggccaacgcctga
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