KEGG   Variovorax sp. PMC12: C4F17_14085
Entry
C4F17_14085       CDS       T05380                                 
Symbol
putA
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00250  Alanine, aspartate and glutamate metabolism
vam00330  Arginine and proline metabolism
vam01100  Metabolic pathways
vam01110  Biosynthesis of secondary metabolites
Module
vam_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    C4F17_14085 (putA)
   00330 Arginine and proline metabolism
    C4F17_14085 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vam03000]
    C4F17_14085 (putA)
Enzymes [BR:vam01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     C4F17_14085 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     C4F17_14085 (putA)
Transcription factors [BR:vam03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    C4F17_14085 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: AVQ81997
LinkDB
Position
1:3011413..3015153
AA seq 1246 aa
MSTTNDSDPLPSSFAAFADGLPPGPSPLREQITATWRRAEPEALPPLLEQARLPRGQAEE
AHALAHRIARQLRSRKNASGRAGLVQGLLQEYALSSQEGVALMCLAEALLRIPDAETRNA
LIRDKIAHGQWQTHAGRSPSVFVNAATWGLLLTGKLVATHSETGLSAVLTRLIGKGGEPL
IRKGVDMAMRMMGEQFVTGETIAQALGNARELEAQGFRYSYDMLGEAALTMEDARRYKLA
YEEAIHAIGRASDARGVYEGPGISIKLSALHPRYSRAQHARVMAELYPVLRELTLLAQRY
DIGLNIDAEEADRLELSLDLLERLCFEPALAGWNGIGFVIQAYQKRCPFVIDYVIDLARR
SRHRLMVRLVKGAYWDSEIKRAQIDGLDGYPVYTRKAYTDVSYLACARRLLAAPEAVYPQ
FATHNAHTLAAIYTMADPSRYEPGQYEFQCLHGMGEPLYEQVVGPLGRPCRIYAPVGTHE
TLLAYLVRRLLENGANTSFVNRIADPTISLEALVEDPVATVEHMAAQEGTVGLPHPAIAL
PAALYRTQRRNSRGLDLANDDSLRLLGQSLQATAHEGWHAGPMLAVGADTQSEPADVLNP
ADHRDVVGQVREATPADVESAVSQAAGTAGAWAATPPAERAAMLERAADLLEEQMPRLLG
LLAREAGKTYANAIAEVREAVDFLRFYAAQARSDFSNDTHRALGTMVCISPWNFPLAIFT
GQVAAALAAGNPVLAKPAEQTPLVAAEAVRLLWQAGVPRAAVQLLPGRGETVGASLVADA
RVQGVMFTGSTEVARILQKTLSQRLGAHGAPVPLIAETGGQNAMIVDSSALVEQVVTDVM
ASAFDSAGQRCSALRVLCVQEEAADRLVEMLEGAMAEACIGNPARLAVDVGPVIDAEARD
GIERHIAAMRARGHKVYRQGREHGQDTRHGTFVMPTLIELDSISELQREVFGPVLHLVRY
RRRDLGALVGQINGTGYGLTLGVHTRIDETIAQIVQHAKAGNVYVNRNIVGAVVGVQPFG
GEGLSGTGPKAGGPLYMLRMLSKRPDDAMARAMGGEGACEAVPNAGLSALARWARKTGRD
ALAAQCARFASLSRAGDSRTLAGPTGERNVYTLLPREAVLCLAGTEADRLAQLAAVLSVG
STAIWPADADTQALRASLPAEVQQSVAIASDWRSPTVAFDAALHHGDESTLADAMQRIAA
RPGPIVGVRAFAPGDADIPLESLVVERALSVNTAAAGGNASLMTIG
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgagcaccaccaacgactccgaccccctgccctcctcgttcgcggcattcgccgacggc
ctgccgcccggcccttcgccgctgcgcgagcagatcaccgcgacctggcgccgcgccgaa
cccgaggcattgccgccgcttctcgaacaggcccgcctgccgcgcgggcaggccgaagag
gcgcatgcgctggcgcatcgcatcgcgcggcaactgcgctcgcgcaagaacgcgagcggc
cgcgccggcctcgtgcaggggctgttgcaggagtacgcgctgtcgtcccaggaaggcgtc
gcgctgatgtgcctggccgaagcgctgctgcgcattcccgatgccgagacgcgcaacgcg
ctgatccgcgacaagatcgcccacggccagtggcagacgcatgcgggccgcagcccgtcg
gtgttcgtcaacgccgccacctggggcctgctgctgaccggcaaactggtggccacgcac
agcgagaccggcctgtcggccgtgctcacgcgcctgatcggcaagggcggcgagccgctg
atccgcaagggcgttgacatggcgatgcgcatgatgggcgagcagttcgtcaccggagaa
accatcgcgcaggcgctgggcaacgcgcgcgagctggaggcgcagggctttcgctattcg
tacgacatgctgggcgaagccgcgctcaccatggaagacgccaggcgctacaagctcgcc
tatgaagaggcgattcacgcgatcggcagggcctcggatgcgcgcggcgtgtatgagggc
ccgggcatctccatcaagctctcggcgctgcacccgcgctacagccgcgcgcagcacgcg
cgcgtgatggcggagctgtacccggtgctgcgcgaactgacgctgctggcgcagcgctac
gacatcggcctgaacatcgacgccgaggaagccgaccggctggagctgtcgctcgacctg
ctggagcgcctgtgcttcgagccggcgctcgcgggctggaacggcatcggcttcgtcatc
caggcctaccagaagcgctgccccttcgtgatcgactacgtgatcgacctcgcgcgccgc
agccgccaccggctgatggtgcggctggtgaagggcgcctactgggacagcgagatcaag
cgcgcgcagatcgacgggctcgacggctacccggtctacacgcgcaaggcctacaccgac
gtgtcttacctcgcctgcgcgcgcaggctgctcgccgcgccggaggcggtgtacccgcag
ttcgccacgcacaacgcgcacacgctggccgccatctacaccatggccgatccgtcgcgc
tacgagccggggcagtacgagttccagtgcctgcacggcatgggcgagccgctgtacgag
caggtggtcggcccgctcgggcggccgtgccgcatctatgcgcccgtgggcacgcacgaa
acgctgctggcctacctggtgcgccgcctgctggagaacggcgcgaacacctcgttcgtg
aaccgcatcgccgacccgacgatttcgctggaggcgctggtggaagacccggtggcaacg
gtggaacacatggccgcgcaggaaggcacggtggggctgccgcatccggccatcgcgctg
cctgcggcgctgtaccgcacgcagcgccgaaactcgcgcgggctcgatcttgcgaacgac
gacagcctgcgcctgctgggccagagcctgcaggccaccgcgcatgagggctggcatgcc
gggccgatgctggcggtgggcgccgacacgcaaagcgaaccggccgatgtgctgaacccc
gccgaccatcgcgatgtggtcgggcaggtgcgggaggccacgccggccgatgtcgaatcc
gccgtttcgcaagccgcgggcactgccggcgcctgggccgccacgccgcccgccgagcgt
gccgccatgctcgagcgcgccgccgatctgctcgaagaacagatgccgcgcctgctcggg
ctgctggcgcgcgaggccgggaagacctatgccaacgccattgccgaagtgcgcgaggcg
gtggacttcctgcgcttctatgcggcgcaggcgcgcagcgacttctcgaacgacacgcac
cgcgcgctcggcacgatggtgtgcatcagcccgtggaattttccgctcgcgatcttcacc
ggccaggtggcggccgcgctcgcggccggcaacccggtgctcgccaagccggccgagcag
acgccgctggtcgccgccgaggcggtgcgcctgctgtggcaggccggcgtgccgcgcgcc
gcggtgcagctgctgccgggacgcggcgagacggtgggcgccagcctggtcgccgacgcg
cgtgtgcagggcgtgatgttcaccggctcgaccgaggtcgcgcgcatcctgcagaagacg
ctgtcgcagcgcctcggtgcccacggcgcgccggtgccgctgatcgcggagacgggcggg
cagaacgcgatgatcgtggactcctccgcgctggtggagcaggtcgtcaccgacgtgatg
gcctcggccttcgacagcgccggccagcgctgctcggccctgcgcgtgctgtgcgtgcag
gaagaagcggccgaccggctggtcgagatgctcgaaggcgcgatggccgaggcctgcatc
ggcaatcccgcgcggctggccgtggacgtgggtccggtgatcgacgccgaggcgcgcgac
ggcatcgagcgccacatcgcagccatgcgcgcgcgcggccacaaggtctaccgccagggc
cgcgagcatgggcaggacacgcgccacggcaccttcgtgatgcccacgctgatcgagctg
gacagcatttcggaactgcagcgcgaagtgttcggcccggtgctgcacctggtgcgctac
cgccggcgcgaccttggcgcgctggtcgggcagatcaacggcacgggctacggcctgacg
ctgggcgtgcacacgcgcatcgacgagaccatcgcgcagatcgtgcagcacgcgaaggcg
ggcaacgtgtacgtcaaccgcaacatcgtgggcgcggtggtgggcgtgcagcccttcggc
ggcgaagggctgtcgggcaccgggccgaaggcgggcgggccgctgtacatgctgcgcatg
ctgtcgaagcggcccgacgatgcgatggcgcgggcgatgggtggcgaaggcgcttgcgag
gcggtgccgaacgcaggcctgtcggcgctggcccgctgggcccggaagaccgggcgcgac
gcgctggccgcgcaatgcgcgcgcttcgcatcgctgtcgcgcgccggcgattcacgcacg
ctggccggcccgaccggcgagcgaaacgtctacacgctgctgccgcgcgaggcggtgctc
tgcctggccggcaccgaggccgaccggctggcgcaactggcggccgtgctgtcggtgggc
agcaccgccatctggccggccgatgccgacacgcaggccctgcgtgcgtcgctgccggcc
gaggtgcagcagagcgtggccatcgccagcgactggcgctcgccgaccgtggccttcgac
gccgcgctgcaccacggcgacgagagcaccctggccgacgcgatgcagcgcattgccgcg
cggcccggccccatcgtcggcgtgcgggccttcgcgccgggcgacgcggacattccgctc
gaaagcctggtggtggaacgcgcgctcagcgtcaacaccgcggctgcgggcggcaacgca
agcctgatgacgatcggctga

DBGET integrated database retrieval system